Table 1.
P. americana assembly | ||
Metrics | Var. drymifolia | Hass cultivar |
No. of contigs | 99,957 | 8,135 |
Total length of contigs, bp | 668,137,248 | 912,697,600 |
No. of scaffolds | 42,722 | — |
Total length of scaffolds, bp | 823,419,498 | — |
Longest contig/scaffold, bp | 254,240/4,610,966 | 2,811,280/– |
Mean contig/scaffold length, bp | 6,684/19,274 | 112,194/– |
N50 contig/scaffold length, bp | 11,724/323,854 | 296,371/– |
Assembly in scaffolded contigs, % | 87.6 | 0 |
Assembly in unscaffolded contigs, % | 12.4 | 100 |
Protein coding genes (% BUSCO completeness) | 22,441 (86.3%) | 24,616 (85%) |