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. Author manuscript; available in PMC: 2019 Aug 25.

Published in final edited form as: Infect Genet Evol. 2018 Jun 28;72:59–66. doi: 10.1016/j.meegid.2018.06.029

Table 6:

Confusion Matrix of RuleTB with refined lineages.

Sensitivity	Predicted Lineage								Overall accuracy: 94.0%
Sensitivity	EAI	East-Asian	Euro-American	Indo-Oceanic	M. africanum 1	M. africanum 2	M. bovis	M. caprae	Overall accuracy: 94.0%
88.2%	30	1	3	0	0	0	0	0	EAI	Actual Lineage
93.1%	5	68	0	0	0	0	0	0	East-Asian
96.0%	3	5	217	1	0	0	0	0	Euro-American
98.1%	1	0	0	53	0	0	0	0	Indo-Oceanic
50.0%	0	0	1	2	4	1	0	0	M. africanum 1
50.0%	0	0	0	0	1	1	0	0	M. africanum 2
100%	0	0	0	0	0	0	5	0	M. bovis
100%	0	0	0	0	0	0	0	2	M. caprae
	76.9%	91.9%	98.2%	94.6%	80.0%	50.0%	100%	100 %	Specificity