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. 2019 Aug 1;11(15):5433–5444. doi: 10.18632/aging.102125

Table 2. Peak SNPs associated with annualized percent change of CSF Aβ42.

CHR SNP Gene Position Function A1/2 MAF βa P value
16 rs13333659 CBFA2T3 89038880 Intron T/G 0.177 −0.034 2.24×10−9
16 rs57706252 CBFA2T3 89030609 Intron C/T 0.167 −0.029 1.09×10−6
9 rs35878400 TRPM6 77482795 Intron T/C 0.273 0.024 1.87×10−6
8 rs6987191 / 138246221 / C/T 0.131 −0.031 6.99×10−6
17 rs113685315 RBFOX3 77390248 Intron A/G 0.162 0.025 8.31×10−6
3 rs55732227 PDZRN3 73611629 Intron T/A 0.309 −0.020 9.86×10−6

Abbreviations: CHR = chromosome; SNP = single nucleotide polymorphism; MAF = minor allele frequency; A1/2 = minor allele/major allele.

a β effect size from GWAS means the annualized percent change of CSF Aβ42 conferred by one copy of the minor allele.