Table 4.

mRNA-seq overview.

Sample	Total reads	% of >= Q30 bases	Trimmed reads	Total mapped reads	% of total mapped reads	Unmapped reads	% of unmapped reads
Uninfected tree shrew liver (#1)	51.46	91.12	49.70	40.02	80.53	9.68	19.47
Uninfected tree shrew liver (#2)	52.91	90.82	50.98	45.73	82.96	9.39	17.04
Uninfected tree shrew liver (#3)	57.20	90.99	55.12	40.86	80.15	10.12	19.85
Uninfected tree shrew liver (#4)	53.87	90.86	51.85	42.14	81.26	9.72	18.74
HBV-C 1 dpi tree shrew liver (#1)	94.47	90.76	91.16	76.55	83.97	14.61	16.03
HBV-C 1 dpi tree shrew liver (#2)	111.28	90.31	107.00	87.40	81.68	19.60	18.32
HBV-C 3 dpi tree shrew liver (#1)	93.80	90.60	90.49	72.73	80.37	17.76	19.63
HBV-C 3 dpi tree shrew liver (#2)	129.30	90.44	124.43	99.89	80.27	24.54	19.73
HBV-A 21 dpi tree shrew liver (#1)	200.98	90.15	191.47	149.06	77.85	42.41	22.15

Read values represent millions of reads.