Table 1.
Parameter | Best fit | Confidence interval | Description |
---|---|---|---|
X0* (OD600) | 0.064 | Initial cell concentration | |
C* (OD600) | 5.8828 | Maximum bacterial concentration | |
B (t−1) | 0.6384 | Cell growth rate | |
M (t) | 3.2823 | Cell growth inflection time | |
kA () | 1, 561.68 | 1, 000−2, 000 | AI-2 velocity production |
km1 (OD600) | 1.5793 | 0.8491−10 | the cell growth at half of kA |
Xδ** (OD600) | 5.7953 | Bacterial concentration at the stationary phase | |
kXA (t−1) | 343.98 | 400−500 | AI-2 uptake rate by PTS |
km2 (OD600) | 5.8205 | 4.4554−5.8211 | Cell growth at half of kXA |
kLA (β−gal·t−1) | 0.0044 | 0.0001−0.0999 | AI-2 uptake rate by LsrACDB proteins |
km3 (OD600) | 3.9128 | 0.001−10 | Cell growth at half of kL |
kL () | 0.5825 | 0.1−5 | Operon expression rate |
kAL () | 0.0028 | 0.0001−1 | lsrACDB genes expression rate |
kR (t−1) | 0.1037 | 0.001−5 | lsrR gene expression rate |
n1 | 2.9302 | 0.8096−10 | Exponent for adjusting curves |
n2 | 8.9542 | 2.0857−9 | Exponent for adjusting curves |
n3** | 0.0017 | Exponent for adjusting curves |
The symbol * means that parameters were fixed according to data in Xavier and Bassler (2005a). Symbol ** means that parameters were fixed based on the profile likelihood graphics. The confidence interval after 500 bootstrap repetitions was calculated within 2.5 and 97.5% quantiles, the confidence interval for parameters in Equation (1) were not calculated.