Table 1.
QTLs for tolerance to anaerobic germination detected in an F2 population derived from IR64/Kharsu 80A population
| QTL | Chr. | Flanking markers | Peak marker | QGene IM | QGene CIM | QTL Cart. IM | QTL Cart. CIM | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| LOD | R2 | Adda | Domb | LOD | R2 | Add | Dom | LOD | R2 | Add | Dom | LOD | R2 | Add | Dom | ||||
| qAG3 | 3 | id3002377–id3004190 | id3003215 | 5.9 | 18.4 | 8.1 | 4.9 | ||||||||||||
| qAG7.1 | 7 | id7000519–id7002260 | wd7000465 | 5.5 | 17.5 | 10.7 | −2.4 | 4.8 | 15.4 | 9.1 | −0.6 | 5.7 | 12.5 | 9.3 | 6.9 | ||||
| qAG7.2 | 7 | id7002427–id7003359 | d7003072 | 7.7 | 23.3 | 12.1 | −7.5 | 7.1 | 13.5 | 8.7 | 8.5 | ||||||||
| qAG7.3 | 7 | id7003853–id7004429 | id7004429 | 6.5 | 20.3 | 9.4 | −4.1 | 5.5 | 17.2 | 7.1 | −2.9 | 7.5 | 12.6 | 8.0 | 7.7 | 5.0 | 4.2 | 5.0 | 7.1 |
a
Additive effects are shown for each QTL.
b
Dominant effect are shown for each QTL.
Bold LOD scores were above the p = 0.01 threshold, normal font is above p = 0.05 threshold.