Table 1.
List of samples used in this study.
| Location | Type | Species | Sample | N | Year | Accession number |
|---|---|---|---|---|---|---|
| Burkina faso | ||||||
| Binde | flock | sheep | Ns | 2/5 | 2014 |
MK777897 MK777901 |
| Ouindigui | flock | goat | Ns, Lg | 0/3 | 2014 | - |
| flock | sheep | Ns | 0/2 | 2014 | - | |
| Pibaore | flock | sheep | Ln | 2/3 | 2014 | MK777902 |
| Sabou | flock | sheep | Ns | 2/2 | 2014 | failed |
| Toece | flock | sheep | Lg, Ln, Sp | 0/3 | 2014 | - |
| Zeguedeguin | flock | goat | Os | 1/1 | 2008 | MK777898 |
| Ghana | ||||||
| Atta Bagbe | flock | goat | Lg, Sp | 2/3 | 2014 |
MK777904 MK777905 |
| Ayensudo | flock | goat | Lg,Ln | 1/2 | 2014 | MK777904 |
| Enyitsewdo | flock | goat | Lg, Ln, Sp | 2/3 | 2014 | MK777899 |
| Wyamoah | flock | goat | Lg, Ln, Sp | 4/4 | 2014 | MK777905 |
| Wyomoah | flock | goat | Lg, Ln, Sp | 1/4 | 2014 | MK777905 |
| Mali | ||||||
| Bamako | market | goat | Lg | 1/1 | 1999 | MK777896 |
| Dialafara | market | goat | Os | 1/1 | 2014 | MK777888 |
| Kolondieba | market | goat | Os | 10/11 | 2014 |
MK777903 MK777894 MK777895 |
| Tousseguela | market | goat | Os | 3/3 | 2014 |
MK777892 MK777893 |
| Samako | market | goat | Os | 8/8 | 2014 |
MK777889 MK777890 MK777891 |
| Sekou | market | goat | Os | 5/5 | 2014 | MK777887 |
| Mauritania | ||||||
| Atar | flock | goat | Os | 1/8 | 2014 | MK777900 |
| flock | sheep | Os | 0/3 | 2014 | - | |
| Senegal | ||||||
| Dakar | market | goat | Os | 8/39 | 2013 | MK777907 |
| market | sheep | Os | 1/1 | 2013 | MK777906 | |
| Total | 57/115 | 21 | ||||
Location indicates the town where samples were collected or the main town closest to sampling site. Type indicates if samples were collected from flocks or in a market. N, number of positive samples/total samples tested. Lg, lung; Ln, lymph node; Os, ocular swab; Sp, spleen; failed, sequencing attempts failed; Accession number, GenBank accession number. Multiple accession numbers are given for one location when multiple non-identical sequences could be obtained from PPRV-positive samples. Accession numbers are repeated when the same sequence was obtained from several locations. Total of accession number is the number of non-identical sequences obtained.