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. 2019 Aug 28;93(18):e00941-19. doi: 10.1128/JVI.00941-19

TABLE 1.

Primers used for amplification of the RVA VP8*, VP7, and NV P domain coding regions

Strain Sequence (5′–3′)a Construct generated Restriction enzyme site Sense
G6P[1] NCDV GTGGATCCATGGCTTCACTCATTTATAGAC VP8* full-length BamHI Positive
GCCTCGAGTCATCTCGTATTTTGTATTGGTGG XhoI Negative
G6P[5] WC3 GTGGATCCATGGCTTCGCTCATATACAG VP8* full-length BamHI Positive
GCCTCGAGTCATCTGGTGTTTTGGATTG XhoI Negative
GGCTTTAAAAGAGAGAATTTCCGT VP7 full-length Positive
GGTCACATCATACAATTCTAATCT Negative
G4P[5] RotaTeq GTGGATCCATGGCTTCGCTCATATACAG VP8* full-length BamHI Positive
GCCTCGAGTCATCTGGTGTTTTGGATTG XhoI Negative
GGCTTTAAAAGAGAGAATTTCCGT VP7 full-length Positive
GGTCACATCAAACAGTTCTATTTT Negative
G3P[3] CU-1 GTGGATCCATGGCTTCGCTCATTTATAGAC VP8* full-length BamHI Positive
GCCTCGAGTCATCTTGTATTTTGAATCGGTGG XhoI Negative
G11P[25] Dahaka GTGGATCCATGGCTTCGTTAATTTACAGAC VP8* full-length BamHI Positive
GCCTCGAGTCAACGTGTATTCTGAATTGGTGG XhoI Negative
VA387 (GII.4) GCACGGATCCTCAAGAACTAAACCATTCACC P-CDCRGDCFC BamHI Positive
GCATGCGGCCGCTTAGCAAAAGCAATCGCCACGGCAATC GCA TAATGCACGTCTGCGCCCCGC NotI Negative
a

Underlining indicates the restriction enzyme site described in column 4.