TABLE 1.
A summary of the custom-curated genome database used in this work
| Unique domain |
Unique phyla | No. of unique classes |
No. of unique orders |
No. of unique families |
No. of unique genera |
No. of unique lineages |
No. of cultured lineages |
No. of uncultured lineages |
|---|---|---|---|---|---|---|---|---|
| Bacteria | Actinobacteriota | 3 | 9 | 22 | 50 | 2,286 | 2,115 | 171 |
| Bacteroidota | 3 | 7 | 19 | 50 | 1,606 | 741 | 865 | |
| Campylobacterota | 1 | 1 | 6 | 8 | 270 | 203 | 67 | |
| Cyanobacteria | 2 | 3 | 4 | 7 | 119 | 84 | 35 | |
| Deinococcota | 1 | 1 | 2 | 2 | 44 | 44 | 0 | |
| Desulfobacterota | 2 | 2 | 2 | 4 | 43 | 23 | 20 | |
| Elusimicrobiota | 1 | 1 | 1 | 1 | 22 | 0 | 22 | |
| Fibrobacterota | 1 | 1 | 1 | 1 | 34 | 22 | 12 | |
| Firmicutes | 3 | 10 | 23 | 48 | 1,543 | 1,356 | 187 | |
| Firmicutes A | 2 | 7 | 10 | 31 | 600 | 304 | 296 | |
| Firmicutes B | 1 | 1 | 1 | 1 | 22 | 11 | 11 | |
| Firmicutes C | 1 | 2 | 3 | 4 | 53 | 32 | 21 | |
| Fusobacteriota | 1 | 1 | 2 | 2 | 40 | 40 | 0 | |
| Marinisomatota | 1 | 1 | 1 | 1 | 10 | 0 | 10 | |
| Nitrospirota | 2 | 2 | 2 | 2 | 30 | 6 | 24 | |
| Nitrospirota A | 1 | 1 | 1 | 1 | 14 | 2 | 12 | |
| Patescibacteria | 6 | 16 | 26 | 36 | 707 | 0 | 707 | |
| Proteobacteria | 3 | 25 | 59 | 163 | 5,589 | 3,952 | 1,637 | |
| Spirochaetota | 3 | 4 | 4 | 6 | 153 | 89 | 64 | |
| Synergistota | 1 | 1 | 1 | 1 | 19 | 2 | 17 | |
| Thermotogota | 1 | 1 | 2 | 2 | 23 | 15 | 8 | |
| Verrucomicrobiota | 2 | 4 | 5 | 7 | 84 | 16 | 68 | |
| Archaea | Crenarchaeota | 1 | 1 | 1 | 2 | 68 | 7 | 61 |
| Euryarchaeota | 2 | 2 | 2 | 2 | 45 | 26 | 19 | |
| Halobacterota | 4 | 5 | 7 | 9 | 164 | 97 | 67 | |
| Thermoplasmatota | 1 | 1 | 2 | 9 | 147 | 0 | 147 | |
| Total | 26 | 50 | 110 | 209 | 450 | 13,735 | 9,187 | 4,548 |