TABLE 5.
Metatranscriptomic MaAsLin enrichment results with relative abundance quartiles
| Pathway | Enrichment (CPM) for: |
Coefficient | Enrichment
group |
P value | FDR-corrected
P value |
|||
|---|---|---|---|---|---|---|---|---|
| CDI− Q1 | CDI− Q3 | CDI+ Q1 | CDI+ Q3 | |||||
| Valine leucine and isoleucine biosynthesis | 9,514.11 | 15,392.90 | 5,648.81 | 8,337.13 | −0.02054 | CDI− | 0.008 | 0.146 |
| Carbon fixation in photosynthetic organisms | 10,333.69 | 14,029.93 | 6,935.82 | 8,324.76 | −0.01236 | CDI− | 0.008 | 0.146 |
| Protein processing in endoplasmic reticulum | 141.98 | 2,011.25 | 0.00 | 35.63 | −0.0226 | CDI− | 0.024 | 0.255 |
| Glycine serine and threonine metabolism | 17,065.75 | 24,255.21 | 13,585.16 | 17,256.03 | −0.0103 | CDI− | 0.025 | 0.255 |
| Histidine metabolism | 8,980.54 | 13,015.11 | 6,643.91 | 8,720.96 | −0.01492 | CDI− | 0.032 | 0.301 |
| One-carbon pool by folate | 8,894.96 | 14,537.30 | 6,096.51 | 8,641.10 | −0.01285 | CDI− | 0.056 | 0.390 |
| C branched dibasic acid metabolism | 5,504.79 | 9,086.76 | 4,008.12 | 6,235.85 | −0.01223 | CDI− | 0.059 | 0.392 |
| Alpha-linolenic acid metabolism | 0.00 | 207.16 | 693.91 | 1,265.72 | 0.02426 | CDI+ | 0.000 | 0.029 |
| Bacterial chemotaxis | 167.31 | 1,297.16 | 2,265.06 | 4,147.41 | 0.03489 | CDI+ | 0.000 | 0.029 |
| Ascorbate and aldarate metabolism | 526.98 | 2,203.76 | 3,161.59 | 6,267.15 | 0.03851 | CDI+ | 0.000 | 0.029 |
| Ethylbenzene degradation | 0.00 | 180.42 | 497.38 | 1,033.91 | 0.02145 | CDI+ | 0.001 | 0.029 |
| Geraniol degradation | 0.00 | 511.95 | 848.86 | 1,080.13 | 0.02247 | CDI+ | 0.001 | 0.029 |
| Flagellar assembly | 0.00 | 1,133.64 | 1,080.82 | 7,448.64 | 0.04871 | CDI+ | 0.001 | 0.029 |
| Two-component system | 14,066.55 | 21,493.11 | 25,306.60 | 40,448.82 | 0.06355 | CDI+ | 0.001 | 0.029 |
| ABC transporters | 28,206.82 | 44,320.11 | 48,815.21 | 59,718.37 | 0.05873 | CDI+ | 0.002 | 0.090 |
| Sulfur relay system | 2,878.55 | 6,146.67 | 6,467.43 | 7,358.35 | 0.02199 | CDI+ | 0.003 | 0.090 |
| Linoleic acid metabolism | 0.00 | 2.72 | 20.77 | 344.47 | 0.00917 | CDI+ | 0.003 | 0.090 |
| Ether lipid metabolism | 0.00 | 26.61 | 20.77 | 344.47 | 0.00915 | CDI+ | 0.003 | 0.090 |
| Chlorocyclohexane and chlorobenzene degradation | 0.00 | 21.93 | 125.99 | 506.71 | 0.01062 | CDI+ | 0.004 | 0.090 |
| Biosynthesis of siderophore group nonribosomal peptides |
37.17 | 647.97 | 629.22 | 2,408.83 | 0.0236 | CDI+ | 0.005 | 0.120 |
| Fluorobenzoate degradation | 0.00 | 5.39 | 59.17 | 392.77 | 0.01066 | CDI+ | 0.009 | 0.165 |
| Sulfur metabolism | 4,620.15 | 9,094.60 | 7,747.39 | 11,277.50 | 0.02683 | CDI+ | 0.010 | 0.165 |
| Toluene degradation | 0.00 | 33.18 | 66.83 | 336.92 | 0.0094 | CDI+ | 0.014 | 0.206 |
| Quorum sensing | 14,686.72 | 18,688.39 | 18,603.71 | 23,100.57 | 0.02664 | CDI+ | 0.023 | 0.255 |
| Phosphotransferase system | 4,091.52 | 9,124.89 | 11,965.61 | 14,977.45 | 0.04152 | CDI+ | 0.029 | 0.279 |
| Mitogen-activated protein kinase signaling pathway, fly |
0.00 | 410.01 | 403.97 | 1,096.53 | 0.01406 | CDI+ | 0.033 | 0.306 |
| Lysine degradation | 527.14 | 2,350.37 | 1,856.78 | 2,798.06 | 0.0183 | CDI+ | 0.042 | 0.345 |
| Proteasome | 0.00 | 5.99 | 0.00 | 228.25 | 0.00495 | CDI+ | 0.054 | 0.390 |
| Biofilm formation, Pseudomonas aeruginosa | 1.33 | 1,326.79 | 989.98 | 1,979.08 | 0.01642 | CDI+ | 0.055 | 0.390 |