Table 1.
The analysis of single nucleotide polymorphisms (SNPs).
| SNP | Location | p value for HWE | Genotype | All | Male | Female | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| No. | % in with MAC-LD | p value | No. | % with MAC-LD | p value | No. | % with MAC-LD | p value | ||||
| rs1792773 | CARD17 | 0.4726 | TT | 41 | 21 (51) | 0.831 | 20 | 10 (50) | 0.546 | 21 | 11 (52) | 0.741 |
| 5′ UTR | TC | 120 | 56 (47) | 49 | 18 (37) | 71 | 38 (54) | |||||
| CC | 64 | 29 (45) | 31 | 14 (45) | 33 | 15 (46) | ||||||
| rs2276405 | AIM2 | 0.6921 | TC | 26 | 13 (50) | 0.613 | 12 | 7 (58) | 0.222 | 14 | 6 (43) | 0.463 |
|
Exonic stop gain |
CC | 198 | 93 (47) | 88 | 35 (40) | 110 | 58 (53) | |||||
| rs34298354 | NLRP3 | 0.6985 | CT | 25 | 13 (56) | 0.345 | 16 | 6 (38) | 0.691 | 9 | 8 (89) | 0.019 |
|
Exonic synonymous |
CC | 200 | 92 (46) | 84 | 36 (43) | 116 | 56 (48) | |||||
| rs3806268 | NLRP3 | 0.7203 | AA | 77 | 32 (42) | 0.096 | 30 | 11 (37) | 0.515 | 47 | 21 (45) | 0.153 |
| Exonic | GA | 104 | 57 (55) | 48 | 23 (48) | 56 | 34 (61) | |||||
| synonymous | GG | 44 | 17 (39) | 22 | 8 (36) | 22 | 9 (41) | |||||
| rs7525979 | NLRP3 | 0.9995 | CC | 166 | 79 (48) | 0.511 | 71 | 30 (42) | 0.340 | 95 | 49 (52) | 0.589 |
| Exonic | CT | 54 | 24 (44) | 25 | 9 (36) | 29 | 15 (52) | |||||
| synonymous | TT | 4 | 3 (75) | 4 | 3 (75) | 0 | ||||||
| rs3804099 | TLR2 | 0.6884 | TT | 106 | 54 (51) | 0.582 | 47 | 24 (51) | 0.088 | 59 | 30 (51) | 0.094 |
| Exonic | TC | 100 | 44 (44) | 42 | 17 (41) | 58 | 27 (47) | |||||
| synonymous | CC | 18 | 8 (44) | 10 | 1 (10) | 8 | 7 (88) | |||||
| rs3804100 | TLR2 | 0.1096 | CC | 10 | 2 (20) | 0.224 | 7 | 0 | 0.022 | 3 | 2 (67) | 0.657 |
| Exonic | CT | 97 | 45 (46) | 40 | 14 (35) | 57 | 31 (54) | |||||
| synonymous | TT | 117 | 59 (50) | 52 | 28 (54) | 65 | 31 (48) | |||||
| rs5743705 | TLR2 | 0.6776 | CT | 25 | 13 (52) | 0.603 | 11 | 5 (46) | 0.806 | 14 | 8 (57) | 0.637 |
|
Exonic synonymous |
CC | 200 | 93 (47) | 89 | 37 (42) | 111 | 56 (51) | |||||
Genotyping missing: 1 in rs2276405, 1 in rs3804100, 1 in rs3804099, 1 in rs7525979.
Abbreviation: HWE, Hardy Weinberg Equilibrium.