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. 2019 Aug 29;9:12534. doi: 10.1038/s41598-019-47609-3

Table 1.

The analysis of single nucleotide polymorphisms (SNPs).

SNP Location p value for HWE Genotype All Male Female
No. % in with MAC-LD p value No. % with MAC-LD p value No. % with MAC-LD p value
rs1792773 CARD17 0.4726 TT 41 21 (51) 0.831 20 10 (50) 0.546 21 11 (52) 0.741
5′ UTR TC 120 56 (47) 49 18 (37) 71 38 (54)
CC 64 29 (45) 31 14 (45) 33 15 (46)
rs2276405 AIM2 0.6921 TC 26 13 (50) 0.613 12 7 (58) 0.222 14 6 (43) 0.463

Exonic

stop gain

CC 198 93 (47) 88 35 (40) 110 58 (53)
rs34298354 NLRP3 0.6985 CT 25 13 (56) 0.345 16 6 (38) 0.691 9 8 (89) 0.019

Exonic

synonymous

CC 200 92 (46) 84 36 (43) 116 56 (48)
rs3806268 NLRP3 0.7203 AA 77 32 (42) 0.096 30 11 (37) 0.515 47 21 (45) 0.153
Exonic GA 104 57 (55) 48 23 (48) 56 34 (61)
synonymous GG 44 17 (39) 22 8 (36) 22 9 (41)
rs7525979 NLRP3 0.9995 CC 166 79 (48) 0.511 71 30 (42) 0.340 95 49 (52) 0.589
Exonic CT 54 24 (44) 25 9 (36) 29 15 (52)
synonymous TT 4 3 (75) 4 3 (75) 0
rs3804099 TLR2 0.6884 TT 106 54 (51) 0.582 47 24 (51) 0.088 59 30 (51) 0.094
Exonic TC 100 44 (44) 42 17 (41) 58 27 (47)
synonymous CC 18 8 (44) 10 1 (10) 8 7 (88)
rs3804100 TLR2 0.1096 CC 10 2 (20) 0.224 7 0 0.022 3 2 (67) 0.657
Exonic CT 97 45 (46) 40 14 (35) 57 31 (54)
synonymous TT 117 59 (50) 52 28 (54) 65 31 (48)
rs5743705 TLR2 0.6776 CT 25 13 (52) 0.603 11 5 (46) 0.806 14 8 (57) 0.637

Exonic

synonymous

CC 200 93 (47) 89 37 (42) 111 56 (51)

Genotyping missing: 1 in rs2276405, 1 in rs3804100, 1 in rs3804099, 1 in rs7525979.

Abbreviation: HWE, Hardy Weinberg Equilibrium.