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. 2019 Aug 29;8(35):e00549-19. doi: 10.1128/MRA.00549-19

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Copyright © 2019 Scerni Machado et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

PMC Copyright notice

FIG 1 — Maximum likelihood (ML) phylogenetic analysis of EV-C96 (clade A) and EV-C99 (clade B) strains. Nearly complete genome sequences of EV-C96 and EV-C99 strains available in GenBank were identified using BLAST and aligned with the sequences obtained in this study using MAFFT version 7.407 (4). The ML tree was generated with RaxML version 8.2.11 (5). A general time-reversible model with estimates for among site rate heterogeneity (GTRGAMMA) was applied. Node support was assessed using 1,000 bootstrap replicates. Midpoint rooting was applied for visualization. GenBank accession numbers are shown in the tip labels. Bold names indicate the strains sequenced in this study.