MOP |
TRV-130, Morphine, Ligand-free |
CHARMM36, CGenFF |
Unbiased MD |
53.25 μs |
Schneider et al., 2016 |
MOP |
TRV-130, Morphine |
CHARMM36, CGenFF |
Adaptive sampling MD |
460 μs |
Kapoor et al., 2017 |
MOP |
TRV-130, BU72, Naltrexone, β-FNA, Ligand-free |
CHARMM36, CGenFF |
Unbiased MD |
1.5 μs |
Cheng et al., 2018 |
MOP |
BMS-986122, (R)-Methadone, Buprenorphine, Ligand-free |
AMBER03, Stockholm, GAFF |
Unbiased MD |
5.2 μs |
Bartuzi et al., 2019 |
MOP, KOP |
Morphine, Levallorphan, JDTic, Ligand-free |
CHARMM36, CGenFF |
Unbiased MD |
12.5 μs |
Yuan et al., 2015 |
KOP |
5′-GNTI, 6′-GNTI, Ligand-free |
CHARMM36, CGenFF |
Unbiased MD |
1.9 μs |
Cheng et al., 2016 |
KOP |
MP1104, JDTic, Ligand-free |
AMBER ff14SB, LIPID11, GAFF |
Gaussian accelerated MD |
12 μs |
An et al., 2018 |
NOP |
Cebranopadol, C24, Ligand-free |
AMBER ff99SB |
Unbiased MD |
3 μs |
Della Longa and Arcovito, 2019 |
DOP |
BMS-986187, SNC-80 |
CHARMM36, CGenFF |
Metadynamics |
3.6 μs |
Shang et al., 2016 |
CB1 |
THC, THCV, Taranabant, Ligand-free |
CHARMM36, CGenFF |
Unbiased MD |
8 μs |
Jung et al., 2018 |
CB1 |
CP 55,940, GAT228 |
CHARMM36, CGenFF |
MetaDynamics |
– |
Saleh et al., 2018 |
OX2 |
Suvorexant |
AMBER ff98SB, GAFF, Lipid 14 |
Unbiased MD |
400 ns |
Bai et al., 2018 |
OX2 |
Suvorexant, Nag26, Orexin-A, Ligand-free |
AMBER 99sb-ildn, Slipids, GAFF, OPSL-AA |
Unbiased MD |
36 μs |
Karhu et al., 2019 |
D3R |
PF-4363467 |
CHARMM36, GAAMP |
Adaptive sampling MD |
680 μs |
Ferruz et al., 2018 |
D2R, D3R |
SB269652 |
CHARMM36, GAAMP |
Adaptive sampling MD |
76.5 μs |
Verma et al., 2018 |
D3R |
LS-3-134, 4 derivatives |
AMBER ff14SB, GAFF |
Unbiased MD |
4.5 μs |
Hayatshahi et al., 2018 |
mGluR1 |
FITM |
CHARMM27, CGenFF |
Unbiased MD, Adaptive biasing force |
150 ns, 360 ns |
Bai and Yao, 2016 |
mGluR5 |
Mavoglurant, Dipraglurant, Basimglurant, STX107, MPEP, Fenobam, 51D, 51E |
AMBER ff14SB, Lipid14, GAFF |
Unbiased MD |
800 ns |
Fu et al., 2018 |