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. 2019 Feb 9;32(10):1501–1510. doi: 10.5713/ajas.18.0737

Table 1.

Genetic diversity estimated using 30 microsatellite loci in each of 26 goat populations

Population1) MNA±SD NEA±SD HE±SD HO±SD Rt±SD FIS NE(0.05)
LLS 6.00±2.56 2.932±0.315 0.588±0.030 0.491±0.013 5.22±2.13 0.167 120.8
MGS 5.33±1.95 2.847±0.189 0.598±0.033 0.573±0.013 4.7±1.56 0.043 74.1
YLS 6.00±2.68 3.162±0.261 0.628±0.031 0.552±0.013 5.36±2.16 0.123 171.3
ZTS 5.93±2.52 2.88±0.225 0.593±0.034 0.530±0.013 5.17±1.98 0.107 97.1
GZS 5.63±2.27 2.77±0.227 0.582±0.032 0.546±0.013 4.91±1.88 0.062 113.6
LNS 6.47±2.74 3.528±0.245 0.664±0.034 0.619±0.012 5.72±2.26 0.066 153.7
CDM 5.93±2.41 2.877±0.2 0.606±0.028 0.595±0.012 5.11±1.79 0.018 80.4
LLY 5.63±2.22 3.131±0.216 0.64±0.026 0.600±0.013 5.13±1.82 0.062 74.4
LZS 5.47±2.26 2.793±0.219 0.583±0.034 0.539±0.012 4.71±1.77 0.075 75.9
MGR 6.93±2.63 3.664±0.293 0.661±0.037 0.556±0.013 6.19±2.3 0.161 143.1
CDS 7.90±3.08 4.102±0.291 0.709±0.029 0.653±0.011 6.87±2.47 0.080 124.1
XJS 8.23±2.93 3.962±0.29 0.689±0.036 0.616±0.012 7.03±2.27 0.108 101.2
XZS 7.37±3.10 3.625±0.239 0.685±0.027 0.612±0.012 6.61±2.49 0.108 96.1
ZWS 6.87±2.69 3.903±0.303 0.694±0.035 0.622±0.018 6.8±2.66 0.106 569.7
SNB 6.50±2.33 3.685±0.264 0.684±0.028 0.600±0.012 5.86±1.98 0.121 47.5
HWS 7.37±2.28 4.294±0.312 0.729±0.025 0.588±0.013 6.75±1.96 0.195 113.2
JNQ 7.30±2.51 4.369±0.299 0.737±0.024 0.646±0.012 6.56±2.12 0.124 98.3
YMH 7.83±2.77 3.859±0.299 0.704±0.023 0.557±0.013 6.73±2.24 0.210 66.1
LBB 7.67±2.51 3.822±0.234 0.707±0.025 0.628±0.013 6.72±2.07 0.113 76.7
THS 6.47±2.34 3.344±0.237 0.657±0.027 0.615±0.011 5.59±1.95 0.022 134.7
CJB 5.77±2.22 3.275±0.26 0.644±0.029 0.623±0.014 5.32±1.97 0.032 374.2
MTS 5.37±2.09 3.014±0.224 0.625±0.025 0.569±0.012 4.78±1.82 0.091 69.4
YCB 5.93±2.32 3.25±0.23 0.655±0.024 0.623±0.012 5.19±1.88 0.050 100.1
XDH 5.37±2.24 2.912±0.225 0.608±0.030 0.549±0.013 4.74±1.81 0.097 96.8
FQS 4.90±2.40 2.723±0.247 0.569±0.034 0.475±0.012 4.30±1.93 0.168 89
DYS 4.40±2.25 2.424±0.217 0.507±0.039 0.434±0.013 3.89±1.91 0.146 32.7
Average 6.33±2.47 - 0.644±0.030 0.577±0.013 5.61±2.04 0.167 -

Summary statistics of the genetic diversity in 26 goat breeds.

n, sample size; MNA, mean number of alleles; SD, standard deviation; NEA, mean number of effective alleles; HE, expected heterozygosity; HO, observed heterozygosity; Rt, allelic richness; FIS, fixation index; NE(0.05), effective population size based on linkage disequilibrium (minor allele frequency 0.05).

1)

LLS, Longling yellow goat; MGS, Maguan poll goat; YLS, Yuling goat; ZTS, Zhaotong goat; GZS, Guizhou White goat; LNS, Liaoning Cashmere goat; CDM, Chengdu Brown goat; LLY, Longlin goat; LZS, Leizhou goat; MGR, Inner Mongolia Cashmere goat; CDS, Chaidamu goat; XJS, Xinjiang goat; XZS, Tibetan goat; ZWS, Zhongwei goat; SNB, Shannan White goat; HWS, Huanghuai goat; JNQ, Jining Gray goat; YMH, Yimeng Black goat; LBB, Lubei White goat; THS, Taihang goat; CJB, Yangtse River Delta White goat; MTS, Matou goat; YCB, Yichang White goat; XDH, Xiangdong Black goat; FQS, Fuqing goat; DYS, Daiyun goat.