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. 2019 Feb 9;32(10):1501–1510. doi: 10.5713/ajas.18.0737

Table 3.

Contribution by Chinese goat breeds to total diversity, based on Cabalero and Toro [9]1)

Breed2) f ii DNei Contribution to f Contribution to D GDT|i Loss/gain (%) PC1 (%) PC2 (%)
LLS 0.4165 0.1232 0.0108 0.0272 0.7408 0 3.673 3.673
MGS 0.4078 0.1218 0.0102 0.0264 0.7406 0 3.565 3.700
YLS 0.3781 0.1053 0.0091 0.0253 0.7408 0 3.417 3.767
ZTS 0.4130 0.1166 0.0105 0.0260 0.7412 0.1 3.511 3.646
GZS 0.4236 0.1156 0.0110 0.0256 0.7417 0.2 3.457 3.592
LNS 0.3439 0.1123 0.0093 0.0330 0.7386 −0.3 4.456 3.997
CDM 0.4001 0.1279 0.0111 0.0313 0.7396 −0.1 4.227 3.781
LLY 0.3678 0.0990 0.0099 0.0282 0.7409 0 3.808 3.794
LZS 0.4233 0.1177 0.0121 0.0288 0.7416 0.1 3.889 3.605
MGR 0.3442 0.1222 0.0074 0.0276 0.7382 −0.3 3.727 4.037
CDS 0.2967 0.0829 0.0086 0.0343 0.7392 −0.2 4.632 4.078
XJS 0.3159 0.0841 0.0094 0.0335 0.7400 −0.1 4.524 3.983
XZS 0.3217 0.1014 0.0081 0.0306 0.7388 −0.2 4.132 4.051
ZWS 0.3217 0.0961 0.0040 0.0143 0.7400 −0.1 1.931 4.010
SNB 0.3218 0.0884 0.0090 0.0318 0.7399 −0.1 4.294 3.983
HWS 0.2780 0.0808 0.0067 0.0297 0.7389 −0.2 4.011 4.172
JNQ 0.2692 0.0840 0.0073 0.0356 0.7378 −0.4 4.808 4.240
YMH 0.3038 0.0752 0.0083 0.0303 0.7403 0 4.092 4.010
LBB 0.3011 0.0889 0.0071 0.0280 0.7392 −0.2 3.781 4.091
THS 0.3486 0.0928 0.0107 0.0331 0.7406 0 4.470 3.875
CJB 0.3641 0.0940 0.0081 0.0227 0.7411 0.1 3.065 3.794
MTS 0.3806 0.0946 0.0120 0.0317 0.7419 0.2 4.281 3.713
YCB 0.3522 0.0849 0.0098 0.0282 0.7414 0.1 3.808 3.808
XDH 0.3976 0.0986 0.0110 0.0270 0.7421 0.2 3.646 3.646
FQS 0.4361 0.1197 0.0123 0.0278 0.7420 0.2 3.754 3.551
DYS 0.4985 0.1466 0.0119 0.0226 0.7420 0.2 3.052 3.362

f ii, average co-ancestries; DNei, Nei’s genetic distance; f, contribution to global co-ancestry; D, absolute contribution to the total genetic diversity; GDT|i, global diversity; loss/gain(%), the % loss/gain after removing a population from the pool; PC, proportional contribution to gene diversity; PC1 estimates are weighted by population size; PC2 estimates ignore sample size.

1)

Values representing high contributions are shown in boldface. Mean co-ancestry within-breed, f = 0.363; mean Nei’s minimum distance in the metapopulation, D = 0.103; mean co-ancestry in the metapopulation, f = 0.246; global genetic diversity of the metapopulation, GDT = 0.741.

2)

LLS, Longling yellow goat; MGS, Maguan poll goat; YLS, Yuling goat; ZTS, Zhaotong goat; GZS, Guizhou White goat; LNS, Liaoning Cashmere goat; CDM, Chengdu Brown goat; LLY, Longlin goat; LZS, Leizhou goat; MGR, Inner Mongolia Cashmere goat; CDS, Chaidamu goat; XJS, Xinjiang goat; XZS, Tibetan goat; ZWS, Zhongwei goat; SNB, Shannan White goat; HWS, Huanghuai goat; JNQ, Jining Gray goat; YMH, Yimeng Black goat; LBB, Lubei White goat; THS, Taihang goat; CJB, Yangtse River Delta White goat; MTS, Matou goat; YCB, Yichang White goat; XDH, Xiangdong Black goat; FQS, Fuqing goat; DYS, Daiyun goat.