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. 2019 Aug 7;8(8):847. doi: 10.3390/cells8080847

Table 3.

High and moderate affinity peptide sequences derived from BKPyV major capsid protein VP1 that may be presented by the HLA-E*01:01 allelic variant as identified by the machine-learning bioinformatics algorithm NetMHC 4.0. Position: residue number (starting from 0); peptide: amino acid sequence of the potential ligand.

BK Polyomavirus Major Capsid Protein VP1
Position Peptide 1 − log50k(aff) Affinity (nM)
18 KEPVQVPKL 0.186 6716.19
237 TNTATTVLL 0.142 10,773.00
297 NPYPISFLL 0.139 11,067.54