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. Author manuscript; available in PMC: 2020 Sep 1.
Published in final edited form as: Alcohol Clin Exp Res. 2019 Jul 16;43(9):1872–1886. doi: 10.1111/acer.14138

Table 1. Candidate loci for follow-up in Drosophila.

37 human genes that reached pgene<0.001 in human gene-based analyses from SRE GWAS study, whether they have any prior association with phenotypes of interest, and their subsequent highest rated fly ortholog(s) and corresponding DIOPT scores (listed orthologs have a DIOPT score ≥2).

Human Gene Symbol Pgene Previously associated human phenotypes of interest1 Drosophila Gene Symbol DIOPT Score
MEF2B 0.0007412 Obsessive compulsive disorder Mef2 4
APP 0.00050488 Cognition, neuropsychological tests, psychiatric status rating scales, psychotic disorders, tobacco use disorder Appl 13
ATG5 0.00058657 Drug hypersensitivity, tobacco use disorder Atg5 14
BORCS82 0.00050716 Tobacco use disorder, obsessive compulsive disorder CG32590 13
BORCS8-MEF2B3 0.0007412 Tobacco use disorder Mef2 4
GPD2 0.00028942 Fatty liver Gpo1 13
ISL1 0.00038948 ADHD tup 11
PCDH15 0.00012322 Alcoholism, tobacco use disorder Cad99C 9
SFSWAP 0.00038044 Tobacco use disorder su(w[a]) 13
ANKRD6 0.00035656 N/A dgo 4
ASPG 0.00081699 N/A CG6428, CG8526 13
BHLHE40 0.00074851 N/A Several 2
BIRC6 0.00053743 N/A Bruce 15
C1QTNF5 0.00037187 N/A N/A N/A
DEPDC7 9.33E-05 N/A N/A N/A
DSG1 1.27E-05 N/A N/A N/A
EXOC1 2.97E-05 N/A Sec3 14
IKZF1 0.00015571 N/A N/A N/A
LGSN 0.00034442 N/A Gs1 2
LRRTM1 0.00031065 N/A caps, trn 2
MFRP 0.00037187 N/A CG42255 2
MMP17 0.00013157 N/A Mmp2 7
PPP2R5E 0.00059389 N/A wdb 13
PRAMEF11 0.00044431 N/A N/A N/A
PRB1 0.00036335 N/A N/A N/A
PSMD6 0.00062142 N/A Rpn7 15
PXMP2 0.00076238 N/A CG7970 7
SCGN 0.00078013 N/A Cbp53E 8
SCN3B 0.00026792 N/A N/A N/A
SET 0.00023109 N/A Set 13
STRN3 0.00051438 N/A Cka 15
TCP11L1 0.00014072 N/A CG16721 13
THAP2 0.00030577 N/A CG14860 2
TMEM185B 0.00083227 N/A CG14194 12
TMEM53 0.00069173 N/A CG8245 14
USP2 0.00047617 N/A Usp2 9
ZBTB44 5.54E-06 N/A N/A N/A
1

Primary resource was the Public Health Genomics Knowledge Base, supplemented by NCBI literature searches.

2

This locus is also known as MEF2BNB.

3

This locus is also known as MEF2BNB-MEF2B