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. Author manuscript; available in PMC: 2020 Sep 1.
Published in final edited form as: Alcohol Clin Exp Res. 2019 Aug 6;43(9):1887–1897. doi: 10.1111/acer.14148

Table 1.

Showing the primer sequences using for gene methylation and mRNA expression studies.

Primer Name Sequence
hPER1 MFP 5’ ATTTAGGTTTACGTGCGTTC 3’
hPER1 MRP 5’ CGACTCAAAAACGAAAATCG 3’
hPER1 UMFP 5’ TAGTATTAGTATTTAGGTTTATGTGTGTTT 3’
hPER1 UMRP 5’ AACAACAATCCAACTCAAAAACAAAAATCA 3’
hPER2 MFP 5’ GCGGTTTCGTTGCGGTTTAC 3’
hPER2 MRP 5’ GCCGACGCCGTTTCAAACCG 3’
hPER2 UMFP 5’ GTGGTGTGGTGTGGTTTTGTTGTGGTTTAT 3’
hPER2 UMRP 5’ ACACCCCCACACCAACACCATTTCAAACCA 3’
hPOMC MFP 5’ ACGGGGGTGTTAAGTTTTTC 3’
hPOMC MRP 5’ ACTATCCTACCGAAAACGCA 3’
hPOMC UMFP 5’ TATATGGGGGTGTTAAGTTTTTT 3’
hPOMC UMRP 5’ CACTATCCTACCAAAAACACACC 3’
hPER2 BSP FP 5’ GTGTGTTTTTGGTTTTGTTTTAGGT 3’
hPER2 BSP RP 5’-/5Bio/TTAATTTCCTTAACCTTCCCCATAC 3’
hPER2 seq FP 5’ GAGTGGTCGAGTCGCGCGTAG 3’
hPOMC BSP FP 5’GTTGGGGTTAAAAATAGGTGGT 3’
hPOMC BSP RP 5’-/5Bio/TCTATAAAAACCCTCCCTACCC 3’
hPOMC seq FP 5’GGAGTTGTTTTAGATTTT 3’
hPER2 RT FP 5’ TCCAGTGGACATGAGACCAA 3’
hPER2 RT RP 5’ CGCTACTGCAGCCACTTGTA 3’
hPOMC RT FP 5’ AAGCGCTACGGCGGTTTC 3’
hPOMC RT RP 5’ TGATGATGGCGTTTTTGAACA 3’
hGAPDH RT FP 5’ AACCTGCCAAATATGATGAC 3’
hGAPDH RT RP 5’ ATACCAGGAAATGAGCTTGA 3’
h18S RT FP 5’ AAACGGCTACCACATCCAAG 3’
h18S RT RP 5’ CCTCCAATGGATCCTCGTTA 3’
hRPL19 RT FP 5’ ATCGATCGCCACATGTATCA 3’
hRPL19 RT RP 5’ GCGTGCTTCCTTGGTCTTAG 3’

Forward primer (FP), Reverse primer (RP), Methyl forward primer (MFP), Methyl reverse primer (MRP), Un methyl forward primer (UMFP), Un methyl reverse primer (UMRP).