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. 2019 Sep 3;9:12710. doi: 10.1038/s41598-019-49094-0

Table 2.

The Kd_obs and Kd_intr values (nM) for interactions between inhibitor and three CA proteins: CA II, CA VI-mimic, and CA VI.

Inhibitor Lab. name pKa_SA K d_ obs (nM) K d_ intr (nM)
CA II CA VI-mimic CA VI CA II CA VI-mimic CA VI
1. TFS 6.02 20 33 14 8.0 15 1.2
2. EZA 7.82 1.3 (<5.0) 17 (<54) 33 (<54) 0.073 1.1 0.40
3. MZM 6.86 100 330 830 27 97 44
4. VD10-9 8.12 46 130 430 1.4 4.7 2.7
5. VD10-12 8.61 18 100 1100 0.19 1.2 2.4
6. VD10-13 8.14 11 130 200 0.32 4.2 1.2
7. VD10-14 8.84 91 330 1000 0.57 2.4 1.3
8. VD10-16 8.47 9.1 200 1200 0.13 3.3 3.7
9. VD10-18 7.80 3.4 140 200 0.20 9.8 2.5
10. VD10-35 7.28 17 130 67 2.5 22 2.1
11. VD10-39b 7.85 83 140 130 4.6 8.8 1.5
12. VD10-45 7.69 5.8 140 140 0.43 12 2.2
13. VD10-49 7.83 0.65 110 200 0.037 7.2 2.3
14. VD10-50 8.02 9.6 (<43) 330 (140) 1000 (630) 0.37 15 7.9
15. VD11-9 8.05 1.7 100 400 0.061 4.1 3.0
16. VD11-36 10.1 12 500 1100 0.0039 0.20 0.077
17. VD11-67 8.67 5900 100 000 100 000 55 1000 190
18. VD11-51 7.07 3.3 130 160 0.68 31 6.6
19. VD11-56 7.97 20 330 500 0.86 16 4.4
20. VD11-71 8.67 500 2500 3300 4.6 26 6.3
21. VD12-04 8.67 1800 3300 20 000 17 35 38
22. VD12-05 8.15 2.2 50 140 0.065 1.7 0.86
23. VD12-10 10.2 25 (<36) 500 (200) 830 (3900) 0.0070 0.16 0.048
24. VD12-17 8.67 1300 5000 11 000 12 52 21
25. VD11-4-2 8.01 56 100 67 2.2 4.5 0.54
26. VD11-10 7.22 1.2 67 140 0.21 13 4.8
27. VD11-16 7.87 35 1000 2000 1.9 59 22
28. VD11-17 7.87 50 140 330 2.6 8.5 3.6
29. VD11-28 7.87 6.7 200 110 0.35 12 1.2
30. VD11-31 9.96 140 1000 5000 0.070 0.55 0.50
31. VD11-39 7.87 33 2000 1000 1.8 120 11
32. VD11-61 8.53 3.3 140 330 0.042 2.1 0.87
33. E46 8.90 50 50 200 0.28 0.31 0.23
34. E11-6 8.70 5.6 330 1100 0.048 3.3 2.0
35. E11-11 9.40 1000 2000 13 000 1.8 4.0 4.5
36. E11-12 8.90 8.5 500 5000 0.047 3.1 5.7
37. E11-14 8.90 7.1 330 3300 0.039 2.1 3.8
38. E11-15 9.40 560 1300 5000 0.98 2.5 1.8
39. E11-18 8.90 28 (<54) 500 (300) 2500 (1600) 0.15 3.1 2.8
40. E11-37 9.60 3600 3300 6700 4.0 4.2 1.5
41. E11-36 8.30 8.3 500 3300 0.16 12 14
42. E11-52 8.70 2.9 330 1400 0.025 3.3 2.5
43. E11-53 9.60 1700 3300 10 000 1.9 4.2 2.3
44. E11-57 9.60 140 500 3300 0.16 0.63 0.75
45. E11-60 8.70 250 500 3300 2.2 4.9 5.9
46. E11-64 9.40 100 1100 17 000 0.16 2.2 5.5

The observed inhibitor affinities for CA VI-mimic were obtained experimentally by FTSA (pH 7.0, 37 °C), whereas the intrinsic parameters were calculated from the corresponding observed data using pKa of 7.0 for CA VI-mimic at 37 °C as explained in the methods part. The standard error of Kd measurements is ±2-fold. The pKa values of applied sulfonamide amino group (pKa_SA) and inhibitor affinities towards CA II and CA VI have been already reported58,86. Dissociation constants Kds of selected compounds were confirmed by SFA (pH 7.5). Experiments were performed at 23 °C and observed Kds were extrapolated to 37 °C using van’t Hoff equation when enthalpy of binding is −42 kJ/mol. The values at 37 °C are given in parentheses. The determined Kds at 23 °C are given in Table S2.