TABLE 2.
Genome clusters without a type strain genomea
| Cluster | NCBI species | No. of 16S
rRNA genes |
16S hits | Speciesb |
|---|---|---|---|---|
| 155 | L. backii | 28 | L. backii, L. iwatensis | L. backii (?) |
| 185 | L. bombi | 6 | L. bombi | L. bombi (?) |
| 4 | L. coleohominis | 1 | L. coleohominis | L. coleohominis (?) |
| 175 | L. kefiri | 12 | L. kefiri | L. kefiri (?) |
| 165 | L. panisapium | 1 | L. panisapium | L. panisapium (?) |
| 7 | Leuc. carnosum | 4 |
Leuc. gelidum subsp. aenigmaticum, Leuc. carnosum, Leuc. rapi |
Leuc. carnosum (?) |
| 157 | Leuc. citreum | 32 |
Leuc. citreum, Leuc. palmae, Leuc. lactis, Leuc. holzapfelii, Leuc. gelidum subsp. aenigmaticum |
Leuc. citreum (?) |
| 176 | Leuc. pseudomesenteroides | 25 |
Leuc. gelidum subsp. aenigmaticum, Leuc. pseudomesenteroides, Leuc. rapi, Leuc. holzapfelii |
Leuc. pseudomesenteroides (?) |
| 129 | P. parvulus | 1 | P. parvulus | P. parvulus (?) |
| 12 | W. ceti | 25 | W. ceti | W. ceti (?) |
| 184 | W. cibaria | 93 | W. cibaria | W. cibaria (?) |
| 11 | W. hellenica | 1 | W. hellenica, W. bombi | W. hellenica (?) |
| 167 | W. koreensis | 10 | W. koreensis | W. koreensis (?) |
| 164 | NA | 1 | NA | New species 1 |
| 166 | NA | 1 | NA | New species 2 |
| 168 | NA | 5 | NA | New species 3 |
| 169 | NA | 5 | NA | New species 4 |
| 192 | NA | 5 | NA | New species 5 |
| 211 | NA | 1 | NA | New species 6 |
| 25 | NA | 1 | NA | New species 7 |
| 3 | NA | 1 | NA | New species 8 |
| 206 | W. bombi | 0 | NA | Unidentified species 1 |
| 207 | W. hellenica | 0 | NA | Unidentified species 2 |
| 1 | NA | 0 | NA | Unidentified species 3 |
| 132 | NA | 10 | L. fornicalis | Unidentified species 4 |
| 190 | NA | 4 | L. musae | Unidentified species 5 |
| 196 | NA | 4 | L. panisapium | Unidentified species 6 |
| 2 | NA | 5 | L. cerevisiae, L. yonginensis | Unidentified species 7 |
| 217 | NA | 1 | L. caviae | Unidentified species 8 |
a
Leuc., Leuconostoc; NA, not available.
b
A question mark in parentheses indicates that this species is a “best guess” (see “Comparison with published genomes” in Results).