Table 3.

Top 10 SNPs associated with resistance to IPNV in rainbow trout identified using Bayes C model.

Marker	Chr1	Position (Mb)	BF2	Var3	Gene4,5(6)
Time to death
AX-89921775	5	86.195	93.824	0.188	Sentrin-specific protease 5 (346.42)
AX-89964133	13	18.398	43.282	0.087	C-C chemokine receptor type 7 (91.96);
					Integrin alpha-11-like (239.47); Secretory phospholipase A2 receptor-like protein (279.15)
AX-89928391	21	40.422	21.698	0.028	NI7
AX-89972475	Scaffold	3.313	22.659	0.024	Protein FAM49A ( 228.21)
AX-89919030	9	59.547	15.660	0.013	Protein FAM3A (148.87)
					E3 ubiquitin-protein ligase HUWE1 (373.86)
AX-89929860	21	33.915	14.577	0.013	Interleukin-8 (252.85)
AX-89919605	8	15.655	14.905	0.012	Laminin subunit alpha-4 (403.02)
AX-89964260	6	71.349	13.728	0.011	NI
AX-89954884	11	23.271	14.522	0.010	Integrin beta-1 (498.18)
AX-89955973	5	81.679	13.401	0.009	Dynamin 1 (83.40)
Binary Survival
AX-89938762	23	13.468	22.504	0.093	Apoptosis-stimulating of p53 protein 2-like ( 274.14)
AX-89960378	6	69.996	9.787	0.016	NI
AX-89950201	5	29.774	9.274	0.014	Myosin-IIIb-like (60.73)
					Protein FAM78A-like (418.01)
AX-89951900	23	8.146	9.208	0.014	NI
AX-89944302	5	29.773	8.910	0.013	Myosin-IIIb-like (60.41)
					Protein FAM78A-like (417.69)
AX-89928391	21	40.422	8.618	0.013	NI
AX-89952306	14	0.420	8.264	0.010	NI
AX-89946704	5	86.995	7.395	0.008	Lamin-B2 ( 351.97)
AX-89933583	15	13.021	7.392	0.008	E3 ubiquitin-protein ligase RNF31-like (377.72); Interferon regulatory factor 4-like (337.82); Signalosome complex subunit 5 (428.51)
AX-89962297	8	12.919	7.680	0.007	Unconventional myosin-VI-like (38.04); Collagen alpha-1(XII) chain-like (195.72); Sentrin-specific protease 6 (73.33)

¹Chromosome.

²Bayes factor.

³Proportion of variance explained by each individual marker.

⁴Suggestive candidate genes located within 1-Mb window.

⁵Oncorhynchus mykiss used as reference species.

⁶Proximity to the SNP (kbp)

⁷Not identified