Table 1.
Reverse primers used in sapovirus VP1 genotyping.
Genotype | Reverse Primer | Sequence (5’→3’) |
---|---|---|
GI.1 | SaV-VP1-GI.1-R | TCTGGTGARACYCCRTTYTCCAT |
GI.2 | SaV-VP1-GI.2-R | TCAGGTGACACACCATTBTCCAT |
GI.3 | SaV-VP1-GI.3-R | TCAGGTGACAMYCCRTTYTCCAT |
GI.6 | SaV-VP1-GI.6-R | TCAGGGGACACACCRTTYTCCAT |
GI.x | SaV-VP1-GI.x-R | TCRGGKGAVAHNCCRTTBTSCAT |
GII.1 | SaV-VP1-GII.1-R | GCRGGTGATATCCCATTGTCCAT |
GII.2 | SaV-VP1-GII.2-R | GCGGGYGAAATTCCATTGTCCAT |
GII.3 | SaV-VP1-GII.3-R | GCAGGTGATATGCCRTTRTCCAT |
GII.4 | SaV-VP1-GII.4-R | GCRGGDGAKAYRCCRTTRTCCAT |
GII.5 | SaV-VP1-GII.5-R | GCRGGTGATATGCCRTTGTCCAT |
GII.x | SaV-VP1-GII.x-R | GCDGGNGANAYNCCRTTRTCCAT |
GIV.1 | SaV-VP1-GIV.1-R | GCTGGGYGARARCCCRTTCTCCAT |
GV.1 | SaV-VP1-GV.1-R | GANGGTGARCCTCCRTTCTCCAT |