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. 2019 Aug 6;8(8):270. doi: 10.3390/plants8080270

Table 3.

Summary of read data for the results of Canu.

Result 1st 2nd 3rd Combined
Total loaded reads No. of reads 119,022 649,003 127,653 895,678
Total length (bp) 1,495,987,647 6,216,312,936 1,767,114,081 9,479,414,664
Coverage 2.04 8.51 2.42 12.63
Expected corrected reads No. of reads 117,932 647,151 125,836 893,520
Total length (bp) 1,333,102,902 6,187,551,664 1,359,065,630 8,029,184,425
Mean read length (bp) 11,304 7,900 10,800 8,986
N50 length (bp) 49,358 23,337 53,805 72,703
After correction/Before trimming No. of reads 110,540 607,805 116,100 845,774
Total length (bp) 1,235,198,760 5,658,532,542 1,549,842,529 8,673,782,926
Coverage 1.68 7.75 2.12 11.56
After trimming a No. of reads 68,176 403,755 56,719 566,533
Total bases (bp) 411,454,770 2,794,594,634 376,245,841 4,739,533,665
UniTigging/READs No. of reads 68,176 410,746 56,719 577,103
Total length (bp) 424,463,809 2,844,670,276 381,679,172 4,833,385,452
Coverage 0.58 3.89 0.52 6.44
UniTigging/concensus No. of sequences 159 5,740 127 6,124
No. of repeats 28 692 26 712
Length of repeats (bp) 573,105 10,509,344 472,695 14,815,759
Total length (bp) 3,088,777 178,246,454 3,256,717 344,366,012
Coverage 0.004 0.237 0.004 0.459
Unassembled No. of sequences 38,897 168,888 32,340 216,120
Total length (bp) 259,436,098 1,180,881,063 252,418,869 1,832,920,246

a Trimmed reads output.