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. 2019 Sep 3;12:126. doi: 10.1186/s12920-019-0576-6

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Whole genome-based phylogenetic tree, clades, resistome and carried plasmids in 58 S. Typhi isolates in Taiwan. Isolates of six major clades were highlighted by six different color. The strain names followed by parentheses indicate imported strains and the exported countries are labelled by three capital letters within parentheses. The blue square indicates presence of the resistant genes and the green star indicates presence of the indicated plasmids. Abbreviation: GTM, Guatemala; IDN, Indonesia; IND, India; KHM, Cambodia; MMR, Myanmar