KEY RESOURCES TABLE
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Bacterial and Virus Strains | ||
| E. coli BL21(DE3) | Merck-Novagen | Catalog # 69450 |
| Chemicals, Peptides, and Recombinant Proteins | ||
| Sulfide:quinone oxidoreductase (SQOR) | (Jackson et al., 2012)This paper | N/A |
| Monoolein (1-oleoyl-rac-glycerol) | Sigma-Aldrich | Catalog # M7765 |
| n-decyl-β-D-maltopyranoside (DM) | Anatrace | Catalog # D322S |
| 1,2-diheptanoyl-sn-glycero-3-phosphocholine (DHPC) | Anatrace | Catalog # D607 |
| Decylubiquinone (DCQ) | Enzo Life Sciences, Inc. | Catalog # BML-CM115 |
| HiTrap IMAC HP column | GE Healthcare | Catalog # 17092005 |
| Q Sepharose High Performance column | GE Healthcare | Catalog # 17101401 |
| L-selenomethionine | Tokyo Chemical Industry | Catalog # S0442 |
| Critical Commercial Assays | ||
| MembFac HT™ | Hampton Research | HR2-137 |
| Deposited Data | ||
| Crystal structure of Selenomethioine-substituted SQOR | This paper | PDB: 6MO6 |
| Crystal structure of Native SQOR | This paper | PDB: 6MP5 |
| Crystal structure of A. aeolicus SQOR | Marcia et al., 2009 | PDB: 3HYW |
| Crystal structure of A. ferrooxidans SQOR | Cherney et al., 2010 | PDB: 3T31 |
| Crystal structure of A. ferrooxidans SQOR | Cherney et al., 2010 | PDB: 3T2Z |
| Crystal structure of A. ambivalens SQOR | Brito et al., 2009 | PDB: 3H8L |
| Crystal structure of A. vinosum FCSD | Chen et al., 1994 | PDB: 1FCD |
| Crystal structure of T. tepidum FCSD | Hirano et al., 2012 | PDB: 3VRD |
| Crystal structure of T. paradoxus FCSD | Osipov et al., 2018 | PDB: 5N1T |
| Recombinant DNA | ||
| pET23a_MATopzSQOR | (Jackson et al., 2012) | N/A |
| Software and Algorithms | ||
| CCP4i | (Winn et al., 2011) | http://www.ccp4.ac.uk/ |
| iMOSFLM | (Battye et al., 2011) | http://www.ccp4.ac.uk/html/mosflm.html |
| BLEND | (Foadi et al., 2013) | http://www.ccp4.ac.uk/html/blend.html |
| REFMAC5 | (Vagin et al., 2004) | http://www.ccp4.ac.uk/html/refmac5.html |
| PHASER | (McCoy et al., 2007) | http://www.ccp4.ac.uk/html/phaser/html |
| ShelXC/D/E | (Sheldrick, 2008) | http://shelx.uni-goettingen.de/ |
| COOT | (Emsley and Cowtan, 2004) | https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/ |
| PyMOL | Schrödinger | https://pymol.org |
| Phenix | (Adams et al., 2010) | https://www.phenix-online.org/ |
| Phenix.autobuild | (Zwart et al., 2008) | https://www.phenix-online.org/ |
| Phenix.refine | (Afonine et al., 2012) | https://www.phenix-online.org/ |
| Maestro 11.5 | Schrödinger | https://www.schrodinger.com/maestro |
| Flare 1.0 | Cresset | https://www.cresset-group.com/tag/structure-based/ |
| Glide (Release 2018-2) | Schrödinger | https://www.schrodinger.com/glide |
| PPM server | (Lomize et al., 2011) | http://opm.phar.umich.edu/server.php |
| qtPISA | (Krissinel, 2015) | http://www.ccp4.ac.uk/ |
| HARLEM | (Kurnikov, 2018) | https://crete.chem.cmu.edu/index.php/software/harlem-software |
| heliQuest | (Gautier et al., 2008) | http://heliquest.ipmc.cnrs.fr/ |
| dockingserver.com | (Bikadi and Hazai, 2009) | https://dockingserver.com/web/ |