Table 3.
Number of polymorphic sites differentiated in substitutions (Sub), insertions (Ins), and deletions (Del) found in the casein cluster region of Bactrian, dromedary, and alpaca by the comparative genomic analysis using the wild camel sequence (AGVR01039100.1) as reference, including the total numbers of polymorphic sites (TOT) within gene by species and in total.
| C. bactrianus | C. dromedarius | V. pacos | TOT | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sub | Ins | Del | TOT | Sub | Ins | Del | TOT | Sub | Ins | Del | TOT | ||
| CSN1S1 | 17 | 16 | 66 | 99 | 50 | 141 | 57 | 248 | 333 | 248 | 45 | 626 | 973 |
| Intergenic 1 | 6 | 0 | 0 | 6 | 23 | 3 | 0 | 26 | 206 | 15 | 23 | 244 | 276 |
| CSN2 | 7 | 0 | 90 | 97 | 36 | 87 | 91 | 214 | 216 | 8 | 141 | 365 | 676 |
| Intergenic 2 | 70 | 32 | 379 | 481 | 216 | 156 | 378 | 750 | 1085 | 544 | 825 | 2,454 | 3,685 |
| CSN1S2 | 24 | 15 | 17 | 56 | 41 | 28 | 10 | 79 | 360 | 74 | 75 | 509 | 644 |
| Intergenic 3 | 56 | 27 | 105 | 188 | 234 | 84 | 99 | 417 | 1406 | 419 | 342 | 2,167 | 2,772 |
| ODAM | 5 | 1 | 2 | 8 | 30 | 13 | 4 | 47 | 172 | 17 | 36 | 225 | 280 |
| Intergenic 4 | 92 | 165 | 51 | 308 | 148 | 138 | 142 | 428 | 722 | 80 | 1405 | 2,207 | 2,943 |
| CSN3 | 15 | 4 | 3 | 22 | 38 | 65 | 143 | 246 | 220 | 16 | 65 | 301 | 569 |
| TOT | 292 | 260 | 713 | 1,265 | 816 | 715 | 924 | 2,455 | 4,720 | 1,421 | 2,957 | 9,098 | 12,818 |