TABLE 1:
Model parameters.
Parameter | Value/units | Definition | Source |
---|---|---|---|
L | 36–138 nm | Local average lengths of actin filaments | Estimated in Results |
N | 12–46 | Local numbers of subunits in a filament | |
t0 | 13 s | Parameter used in modeling fc(t) | |
τ | 0.66 s | Parameter used in modeling fc(t) | |
ηA | 602 μm–3/μM | Conversion factor | |
μ | 0.4 nm/(s · pN) | Mobility coefficient | Defined in Model |
kactive |
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Active stress coefficient | Computed in Model |
kvisc |
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Shear viscosity coefficient | Estimated in Model |
ρmax | 20.15 × 103nA μM | Maximum actin density | Defined in Model |
nmax | 6500 | Maximum number of actin subunits in a patch | Berro et al., 2010 |
RArp2/3 | 0.035–0.06 | Molar Arp2/3 complex-to-actin ratio | |
G0 | 21.6 μM | Concentration of actin monomers | |
fstall | 10.5 pN | Actin polymerization stalling force | Estimated in Results |
εmax | 6.9 kBT | Maximum energy stored in the patch per subunit | Estimated in Results |
E | 1 GPa | Young’s modulus of the actin filament | Broedersz and MacKintosh, 2014 |
I | πa4/4 nm4 | Rotational inertia of the filament | |
a | 3.5 nm | Radius of the filament cross-section | |
δ | 2.7 nm | Radius of actin subunit | |
WASp0 | 259.6 μm–2 | Surface density of NPFs | Based on Berro et al., 2010 |
Arp0 | 1.3 μM | Concentration of Arp2/3 complex | Berro et al., 2010 |
C0 | 0.8 μM | Concentration of capping protein | |
COF0 | 40 μM | Concentration of cofilin |