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. 2019 Sep 5;14(9):e0222170. doi: 10.1371/journal.pone.0222170

Table 1. Primers used for the RT-LAMP assay for VT strains of Citrus tristeza virus.

Primer name Sequence (5'-3') Primer position (nt)a Primer length (bp)
VT_F3 CGTACCCTCCGGAAATTACG 19–38 20
VT_B3 GGTGGTTGTTTCAGTACCGA 217–236 20
VT_FIP (F1c + F2) AGCGAGCTCCAAGTTTCGACAT-TGCGGGAATTGGTGTAGGT (108–129)-(48–66) 22–19
VT_BIP (B1c + B2) GGTCCTCGACTTTCGCTGTACG-AGTGCAGGACTCCAACGG (133–154)-(196–213) 22–18
VT_LF GGCGTAGTGGGCAATTTGC 71–89 19
VT_LB TTACGTCATCTCGCGCATCT 161–180 20

aThe primer position numbers are based on CA-VT-AT39 CTV strain.