TABLE 1.
Featurea | Data for strain: |
|||
---|---|---|---|---|
CavFT-hAR46 | ATCC 8503 | CT06 | 82G9 | |
Location of origin (yr) | Ohio, USA (2017) | USA | South Korea | Japan |
Accession no. | CP040468 | NC_009615 | NZ_CP022754 | NZ_LR215978 |
Genome size (bp) | 4,952,323 | 4,811,379 | 5,372,666 | 5,212,259 |
No. of CDSb | 4,263 | 4,216 | 4,686 | 4,365 |
G+C content (%) | 45.2 | 45.1 | 45.2 | 45.2 |
No. of rRNAs | 21 | 21 | 21 | 21 |
No. of proteins with functional assignments | 2,694 | 2,639 | 2,875 | NDc |
No. of hypothetical proteins | 1,569 | 1,487 | 1,811 | ND |
No. of antibiotic resistance genes | 24 | 22 | 28 | ND |
No. of genomic polymorphisms of CavFT-hAR046 strain compared to ATCC 8503, CT06, 82G9 strains | ||||
Synonymous SNPs | NAd | 10,600 | 14,748 | ND |
Nonsynonymous SNPs | NA | 3,443 | 4,986 | ND |
Indels | NA | 478 | 689 | ND |
Basic genome features in this table were derived from pairwise analysis using PATRIC annotation definitions.
CDS, coding sequences.
ND, not determined.
NA, not applicable.