Table 3.
SMXL protein identity comparison
| SMXLA-J | gSMXL4 | gSMAX1 | |
|---|---|---|---|
| gSMXL4 | 49.9 | ||
| aSMXL4 | 40.0 | 50.9 | |
| SMXL39 | 39.9 | 48.2 | |
| SMXL3 | 41.6 | 50.7 | |
| SMXL9 | 38.6 | 47.1 | |
| gSMAX1 | 49.1 | ||
| aSMAX1 | 44.6 | 60.4 | |
| SMXL78 | 34.3 | 41.0 | |
| SMXL7 | 34.7 | 41.2 | |
| SMXL8 | 34.1 | 40.9 |
Protein identity comparisons between different SMXL groups. Pairwise identity scores were calculated for each of 167 full-length/near full-length proteins in our alignment, across the 477 amino acids used for phylogenetic reconstruction. For each seed plant sequence, we then averaged their % identity across non-seed plant sequences from SMXLA, SMXLB, SMXLD, SMXLE, SMXLF and SMXLJ clades. We then averaged these scores to reach an average % identity per clade (2nd column). Additionally, for each angiosperm SMXL4/SMXL39/SMXL3/SMXL9 sequence, we calculated % identity with gymnosperm SMXL4 sequences, then averaged across the clade (3rd column). Finally, for each angiosperm SMAX1/SMXL78/SMXL7/SMXL8 sequence, we calculated % identity with gymnosperm SMAX1 sequences, then averaged across the clade (4th column)