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. 2019 Aug 14;32(4):e00007-19. doi: 10.1128/CMR.00007-19

TABLE 11.

Amino acid changes described in transferable OqxAa

Yrc GenBank accession no.b
% identityd Amino acid difference Gram-negative genus or generae Referencef
DNA Amino acid
2007 EU370913g AAP43109 100.0 G8 G16 M19 S30 A113 R116 I159 S183 A199 Q244 R338 D339 ins Enterobacter, Escherichia, Salmonella, Shigella 156
2012 NG_050420 WP_063865358 99.7 V Escherichia, Raoultella, Salmonella, Enterococcus 177
2016 NZ_LVMD01000084 WP_063501637 99.7 S Escherichia
2016 KT727030 AMW92379 99.7 R Enterococcus
2018 CP029215 AWJ07841 99.7 E Escherichia
2018 CP026492 AUY47426 99.7 I Escherichia
2018 KT716392 AMW92376 99.7 H Enterococcus
2016 FLWH01000008 SBY67709 99.5 E V Escherichia
2017 NZ_MKFO01000039 WP_089069082 99.5 E V Escherichia
2017 MOGH01000057 OJM31094 99.5 V R Escherichia 56
2018 JAMW01000061 OXY63391 99.5 K V Salmonella
2018 MG028668 AWG41968 99.5 V T Enterobacter
2018 MG028669 AWG41969 99.5 V C Enterobacter
2018 PTMN01000089 PPW02434 99.2 41PAP Escherichia
a

Gram-positive microorganisms are highlighted in boldface type. No allelic numeration has been included to avoid confusion with a series of K. pneumoniae chromosomal OqxA proteins that are present in GenBank with an assigned allelic numeration. Note that these variants may be present in other genera and that other OqxA variants may remain undetected. ins, insertion.

b

In several cases, multiple valid DNA/amino acid sequences may be found in GenBank.

c

Date of first published report. If no published report has been found, the data for the older GenBank record are reported.

d

The minimum degree of identity considered was 99%. A series of OqxAB efflux pumps with lower levels of identity are present in GenBank, including a transferable oqxAB gene probably derived from an ancestral K. aerogenes isolate (GenBank accession number NZ_BGTY01000006) (see “OqxAB”).

e

In all cases, it is considered that any OqxA reported in a microorganism other than Klebsiella spp. belongs to a transferable gene, irrespective of chromosomal/plasmid location or the absence of specific genetic environment data. The presence of transferable OqxA in Klebsiella spp. is not reported here.

f

First published report.

g

First OqxA described as a transferable determinant.