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. 2019 Aug 26;15(8):e1008010. doi: 10.1371/journal.ppat.1008010

Table 1. Lcn2-dependent K. pneumoniae factors.

Locus ID (VK055_#) Gene Name Log10 Ratio (Lcn2+/+: Lcn2-/-) P Value GenBank Definition
2967 phnG -2.27 5.82E-11 phosphonate C-P lyase system protein PhnG
2193   -2.24 2.84E-14 glyoxalase
1802 gltA -2.23 0.00E+00 citrate (Si)-synthase
358   -2.14 4.44E-16 putative siderophore transport system ATP-binding protein YusV
852   -2.08 1.39E-17 diguanylate cyclase domain protein
4742   -1.97 7.94E-21 hypothetical protein
1264   -1.91 3.56E-266 putative enzyme related to aldose 1-epimerase
679 pqqB -1.89 1.46E-11 coenzyme PQQ biosynthesis protein B
4503   -1.88 7.45E-09 hypothetical protein
3425   -1.80 9.31E-10 putative efflux pump outer membrane protein TtgC
2801   -1.76 0.00E+00 bacterial regulatory, GntR family protein
406 budC -1.76 0.00E+00 diacetyl reductase (S-acetoin forming)
1665 nikE -1.74 2.98E-08 nickel import ATP-binding protein NikE2
494   -1.73 9.41E-30 efflux transporter, RND family, MFP subunit
4907   -1.72 4.07E-09 yejG-like family protein
4402 cysD -1.71 0.00E+00 CysD
4417   -1.71 9.54E-07 MarR family protein
23 rcsA -1.68 3.82E-11 transcriptional regulator of capsular polysaccharide synthesis
3697 envZ -1.66 0.00E+00 EnvZ
1081   -1.64 7.63E-06 bacterial regulatory helix-turn-helix, LysR family protein
2100   -1.64 4.62E-14 primosomal replication PriB and PriC family protein
5166   -1.56 5.12E-12 hypothetical protein
5008 udk -1.55 0.00E+00 deoxycytidine triphosphate deaminase
1530   -1.55 2.84E-10 hypothetical protein
2620   -1.54 1.08E-09 hypothetical protein
4957   -1.54 1.14E-80 osmoprotectant transport system ATP-binding protein
2890   -1.49 4.44E-37 hypothetical protein
2734   1.68 3.46E-103 hypothetical protein
3005 soxR 1.69 1.54E-08 redox-sensitive transcriptional activator SoxR
631   1.70 4.95E-23 zinc-binding dehydrogenase family protein
503   1.74 3.82E-11 pyridoxal kinase
1089   1.79 4.02E-21 type VI secretion lipofamily protein
2579   1.80 9.59E-27 CreA family protein
1763 galE 1.90 2.91E-11 UDP-glucose 4-epimerase
3375   1.91 1.20E-19 hypothetical protein
3418   1.92 1.94E-55 PrpF family protein
3618 nikC 1.93 7.05E-18 nickel ABC transporter, permease subunit NikC
4369   1.97 0.00E+00 binding-protein-dependent inner membrane transport system
2230 iraP 2.02 8.70E-46 anti-adaptor protein for sigmaS stabilization
2009   2.04 1.57E-20 hypothetical protein
4943   2.07 1.46E-11 OprB family protein
953   2.33 5.55E-17 response regulator
1873 ybeC 2.45 3.55E-15 TatE