Table I.
Top 10 upregulated lncRNAs with significantly different expression between tumor and normal tissues in The Cancer Genome Atlas colon cancer data.
| lncRNA | Ensembl_Gene_ID | logFC | P-value | FDR |
|---|---|---|---|---|
| PVT1 | ENSG00000249859 | 2.58 | 1.70×10−67 | 4.23×10−65 |
| CCAT1 | ENSG00000247844 | 4.47 | 1.68×10−59 | 2.51×10−57 |
| BLACAT1 | ENSG00000281406 | 5.12 | 3.88×10−59 | 5.59×10−57 |
| LINC02163 | ENSG00000251026 | 7.08 | 1.19×10−54 | 1.37×10−52 |
| CRNDE | ENSG00000245694 | 4.58 | 1.30×10−52 | 1.31×10−50 |
| MAFG-AS1 | ENSG00000265688 | 2.88 | 7.82×10−51 | 7.51×10−49 |
| RP5-884M6.1 | ENSG00000228742 | 6.31 | 1.04×10−50 | 9.69×10−49 |
| CASC19 | ENSG00000254166 | 4.51 | 3.30×10−50 | 3.02×10−48 |
| RP5-1120P11.1 | ENSG00000237686 | 4.41 | 7.64×10−50 | 6.65×10−48 |
| AC007128.1 | ENSG00000229970 | 4.48 | 2.64×10−48 | 2.17×10−46 |
lncRNA, long non-coding RNA; FC, fold-change; FDR, false discovery rate.