Table II.
Top 10 downregulated lncRNAs with significantly different expression between tumor and normal tissues in The Cancer Genome Atlas colon cancer data.
| lncRNA | Ensembl_Gene_ID | logFC | P-value | FDR |
|---|---|---|---|---|
| XXbac-B476C20.9 | ENSG00000225335 | −2.72 | 2.14×10−173 | 1.60×10−169 |
| CDKN2B-AS1 | ENSG00000240498 | −5.21 | 9.05×10−140 | 3.39×10−136 |
| LINC01645 | ENSG00000224968 | −4.60 | 6.90×10−127 | 1.72×10−123 |
| PP7080 | ENSG00000188242 | −3.48 | 3.24×10−124 | 6.07×10−121 |
| XXyac-YM21GA2.7 | ENSG00000214888 | −5.69 | 7.06×10−120 | 1.06×10−116 |
| RP11-1090M7.1 | ENSG00000265489 | −4.48 | 1.49×10−116 | 1.85×10−113 |
| RP11-396O20.2 | ENSG00000254645 | −5.01 | 1.71×10−114 | 1.83×10−111 |
| AC007182.6 | ENSG00000224721 | −4.67 | 4.65×10−108 | 4.35×10−105 |
| AC106869.2 | ENSG00000226087 | −4.18 | 2.71×10−105 | 2.25×10−102 |
| LINC00682 | ENSG00000245870 | −4.55 | 1.18×10−96 | 8.82×10−94 |
lncRNA, long non-coding RNA; FC, fold-change; FDR, false discovery rate.