Table I.
β-catenin target genes identified in the present study.
CRISPR-Cas9 | RNAi | |||||
---|---|---|---|---|---|---|
Symbol | PCC | P-value | PCC | P-value | Chromosomal location | Description |
ABHD10 | 0.430 | 0.025 | −0.477 | 0.016 | 3q13.2 | Abhydrolase domain containing 10 |
AFG3L2 | −0.427 | 0.026 | 0.371 | 0.012 | 18p11.21 | AFG3 like matrix AAA peptidase subunit 2 |
COPS8 | −0.465 | 0.014 | 0.336 | 0.024 | 2q37.3 | COP9 signalosome subunit 8 |
DHX15 | −0.587 | 0.001 | −0.440 | 0.003 | 4p15.2 | DEAH-box helicase 15 |
GMPS | 0.496 | 0.009 | 0.349 | 0.019 | 3q25.31 | Guanine monophosphate synthase |
IARS2 | −0.421 | 0.029 | −0.341 | 0.022 | 1q41 | Isoleucyl-tRNA synthetase 2, mitochondrial |
MED28 | −0.473 | 0.013 | −0.421 | 0.004 | 4p15.32 | Mediator complex subunit 28 |
MYBa | 0.484 | 0.011 | 0.462 | 0.001 | 6q23.3 | MYB proto-oncogene, transcription factor |
RPL35 | 0.455 | 0.017 | 0.559 | <0.001 | 9q33.3 | Ribosomal protein L35 |
RRAD | 0.559 | 0.002 | 0.487 | 0.001 | 16q22.1 | RRAD, Ras related glycolysis inhibitor and calcium channel regulator |
SRSF10 | −0.537 | 0.004 | −0.383 | 0.010 | 1p36.11 | Serine and arginine rich splicing factor 10 |
SRSF6 | 0.420 | 0.029 | −0.366 | 0.013 | 20q13.11 | Serine and arginine rich splicing factor 6 |
WWP2 | 0.423 | 0.028 | 0.373 | 0.013 | 16q22.1 | WW domain containing E3 ubiquitin protein ligase 2 |
P-values indicate the significance level of the PCC value.
Previously reported as known β-catenin target (51). Cas9, CRISPR associated protein 9; PCC, Pearson correlation coefficient; RNAi, RNA interference.