Table 7.
SNP | Haplotype | Freq (Case) | Freq (Control) | Without adjusted | With adjusted | |||
---|---|---|---|---|---|---|---|---|
OR (95% CI) | P-value | OR (95% CI) | P-value | |||||
Total | rs4803420|rs1038376|rs12979270 | GAC | 0.313 | 0.278 | 1.20 (0.96–1.51) | 0.114 | 1.17 (0.87–1.58) | 0.290 |
GTA | 0.779 | 0.873 | 0.49 (0.37–0.64) | 4.93E-07* | 0.45 (0.31–0.65) | 1.69E-05* | ||
TAA | 0.839 | 0.764 | 1.63 (1.25–2.12) | 2.97E-04* | 1.69 (1.22–2.34) | 0.002* | ||
GAA | 0.695 | 0.642 | 1.28 (1.03–1.60) | 0.026* | 1.24 (0.94–1.63) | 0.133 | ||
Males | rs4803420|rs1038376|rs12979270 | GAC | 0.298 | 0.284 | 1.08 (0.82–1.41) | 0.597 | 1.00 (0.69–1.47) | 0.992 |
GTA | 0.794 | 0.866 | 0.59 (0.42–0.81) | 0.001* | 0.56 (0.35–0.87) | 0.011* | ||
TAA | 0.832 | 0.769 | 1.50 (1.11–2.04) | 0.009* | 1.60 (1.06–2.39) | 0.024* | ||
GAA | 0.672 | 0.651 | 1.10 (0.86–1.42) | 0.454 | 1.00 (0.72–1.39) | 0.997 | ||
Females | rs4803420|rs1038376|rs12979270 | GAC | 0.363 | 0.265 | 1.62 (1.05–2.49) | 0.029* | 1.58 (0.98–2.54) | 0.060 |
GTA | 0.733 | 0.889 | 0.28 (0.16–0.49) | 1.01E-05* | 0.27 (0.15–0.52) | 5.69E-05* | ||
TAA | 0.863 | 0.753 | 2.05 (1.20–3.51) | 0.009* | 1.99 (1.12–3.54) | 0.020* | ||
GAA | 0.767 | 0.624 | 2.18 (1.35–3.52) | 0.001* | 2.15 (1.28–3.62) | 0.004* |
Notes: Block comprised the three closely linked SNPs rs4803420, rs1038376, and rs12979270; P-values were calculated with Pearson’s χ2 tests; *P<0.05 and P values shown in bold are statistically significant.
Abbreviations: OR, odds ratio; 95% CI, 95% confidence interval.