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. Author manuscript; available in PMC: 2020 Sep 6.
Published in final edited form as: J Mol Biol. 2019 Jul 19;431(19):3706–3717. doi: 10.1016/j.jmb.2019.07.025

Table 1. Space Group Fitting.

Diffraction patterns obtained as calculated Fourier transforms from seven KRAS-GppNHp untilted 2D crystals of proteins assembled onto PC-cholesterol-PS membranes were indexed, boxed, and unbent as described in the Methods section. Statistics for space group fitting were obtained using the 2dx ALLSPACE program, which compares the phases of diffraction pattern reflections for internal consistency with 2D space groups, and outputs phase residuals for each space group fit. Using this algorithm, a perfect fit gives a phase residual of 0°, while a random fit yields a 90° phase residual. Note that because internal phase residual comparisons are not relevant with the primitive (p1) space group, the phase residual for p1 is on the basis of signal-to-noise ratios of observed amplitudes. Each untilted 2D crystal examined gave p3 as the optimal space group and, as shown, the averaged phase residual for the p3 space group is significantly less than all other space groups.

group residual group residual group
residual
p1 17.2± 1.3 c12a 54.5± 9.6 p422
53.9± 6.1
p2 55.8± 6.7 p222 56.4± 8.4 p4212
63.2± 3.9
p12b 51.5± 10.4 p2221b 60.6± 5.3 p3
7.8± 4.0
p12a 54.5± 9.6 p2221a 68.0± 3.1 p312
38.5± 2.6
p121b 58.8± 4.2 p22121 63.3± 3.9 p321
37.1± 7.0
p121a 53.7± 7.3 c222 56.4± 8.4 p6
37.7± 7.1
c12b 51.5± 10.4 p4 46.3± 5.9 p622
50.0± 6.0 6.0