Table 5.
FAMILY | GENE | SNP | p | ||||
---|---|---|---|---|---|---|---|
CHANGE | ANALYSIS BY PHENOTYPE |
ALLELE FREQUENCY |
ALLELE VARIANT RECESIVITY HYPOTHESIS | ALLELE VARIANT DOMINANCE HYPOTHESIS | |||
Genes related to glutamate homeostasis | MEF2D | rs1050316 | G > T | 0.907 | 0.729 | 0.836 | 0.665 |
LRP1 | rs11172113 | T > C | 0.583 | 0.439 | 0.963 | 0.319 | |
MTDH | rs1835740 | A > G | 0.596 | 0.740 | 0.527 | 0.543 | |
EAAT2 | rs4354668 | T > G | 0.266 | 0.105 | 0.147 | 0.231 | |
GRIK3 | rs6691840 | A > C | 0.218 | 0.176 | 0.088 | 0.397 | |
CGRP | CALCA | rs3781719 | T > C | 0.023 | 0.029 | 0.794 | 0.007 |
rs145837941 | A > G | – | – | – | – | ||
GABA Receptor system |
GABRE | rs1139916 | A > C | 0.312 | 0.522 | 0.977 | 0.148 |
GABRQ | rs3810651 | A > T | 0.824 | 0.532 | 0.619 | 0.604 | |
GABRA3 | rs6627221 | T > C | 0.271 | 0.190 | 0.977 | 0.074 | |
rs2201169 | T > C | 0.381 | 0.195 | 0.436 | 0.205 | ||
Voltage dependent channels | SCN9A | rs6746030 | G > A | 0.400 | 0.603 | 0.367 | 0.419 |
KCNS1 | rs734784 | A > G | 0.615 | 0.458 | 0.854 | 0.333 | |
P2RX7 | rs2230912 | A > G | 0.972 | 0.863 | 0.950 | 0.837 | |
rs1718119 | C > T | 0.628 | 0.584 | 0.351 | 0.916 | ||
Dopamine receptor | DRD2 | rs1800497 | C > T | 0.775 | 0.699 | 0.773 | 0.569 |
Serotoninergic receptor | HTR2C | rs3813929 | C > T | 0.332 | 0.163 | 0.675 | 0.139 |
TRPfamily | TRPV1 | rs222749 | G > A | 0.040 | 0.021 | 0.013 | 0.102 |
rs222747 | G > C | 0.749 | 0.740 | 0.459 | 0.958 | ||
rs222741 | C > T | 0.922 | 0.777 | 0.843 | 0.698 | ||
TRPV3 | rs7217270 | A > G | 0.553 | 0.275 | 0.446 | 0.317 | |
TRPM8 | rs10166942 | T > C | 0.656 | 0.655 | 0.361 | 0.873 | |
Others | WFS1 | rs734312 | G > A | 0.767 | 0.655 | 0.498 | 0.989 |
TGFBR2 | rs7640543 | G > A | 0.925 | 0.920 | 0.729 | 0.929 | |
MTHFR | rs121434294 | C > T | – | – | – | – |