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. 2019 Sep;21(5):873–883. doi: 10.1016/j.jmoldx.2019.05.006

Table 1.

Primer Sequences for Fusion Confirmation and CRLF2 and EPOR Expression

Gene or gene fusion PCR reaction Forward primer Reverse primer
ZNF274-JAK2 PCR1 5′-GGTTTTACCCCGGAAGAGTG-3′ 5′-GCAGGAAGCTGATGCCTATC-3′
PCR2 5′-TGTAAAACGACGGCCAGTAGGGAAGTGATGCTGGAGAA-3′ 5′-CAGGAAACAGCTATGACCTGCAGATTTCCCACAAAGTG-3′
PAX5-ZCCHC7 PCR1 5′-ACACCAACAAGCGCAAGAGA-3′ 5′-GGCTGGACAGGAATACAGGA-3′
PCR2 5′-TGTAAAACGACGGCCAGTACTTCCTCCGGAAGCAGATG-3′ 5′-CAGGAAACAGCTATGACCCAGATAATGTTTTTGTTGGCTGAA-3′
ATF7IP-PDGFRB PCR1 5′-CCTTGCCAAATCCCACTAAA-3′ 5′-TTTCATCGTGGCCTGAGAAT-3′
PCR2 5′-TGTAAAACGACGGCCAGTGCCACAAGGACTTCTTTACCC-3′ 5′-CAGGAAACAGCTATGACCCCTTCCATCGGATCTCGTAA-3′
CENPC-ABL1 PCR1 5′-ACAGAGCAAGGCCAGAATGT-3′ 5′-ACACCATTCCCCATTGTGAT-3′
PCR2 5′-TGTAAAACGACGGCCAGTTGTATTCAGTCACCAAGCAAAGA-3′ 5′-CAGGAAACAGCTATGACCACGAAAAGGTTGGGGTCATT-3′
NUP153-ABL1 PCR1 5′-CATCTCTGACTCCTTCTGGTGA-3′ 5′-CCACCGTCAGGCTGTATTTC-3′
PCR2 5′-TGTAAAACGACGGCCAGTTGACACCCGGACAAAATAGAG-3′ 5′-CAGGAAACAGCTATGACCGGGGGACACACCATAGACAG-3′
SPTAN1-ABL1 PCR1 5′-ACCGCTTCAAGGAACTCTCA-3′ 5′-TGGTGTCCTCCTTCAAGGTC-3′
PCR2 5′-GTAAAACGACGGCCAGTCAACCCTTAGGCGTCAGAAG-3′ 5′-CAGGAAACAGCTATGACGGATAATGGAGCGTGGTGAT-3′
CRLF2 RT-PCR 5′-ATGCCAGCAAATACTCCAGGAC-3′ 5′-AAGGTAGTTGGTGCACTGGTCAT-3′
EPOR RT-PCR 5′-ATCCTCGTGGTCATCCTGGTG-3′ 5′-GGATGCCAGGCCAGATCTTC-3′
ACTB RT-PCR 5′-CCTGAACCCCAAGGCCAAC-3′ 5′-ACAGCCTGGATAGCAACGTACA-3′