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. 2019 Jun 28;47(15):8036–8049. doi: 10.1093/nar/gkz553

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© The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 4. — (A) Box plots of the total small RNA read counts (y-axis; log2) from the WT, and mutant samples (Mutants: 51A-Rdr1, and 51A-Rdr2). The P-values indicated are from two-tailed wilcoxon test. (B) Set intersection plots for Differentially Expressed (D.E.) SRCs identified by DESeq2 in the mutant samples. We name the intersection groups as shown here (D - Downregulated, U - Upregulated, 1, 2 represents the mutant 51A-Rdr1 and 51A-Rdr2, respectively). For these intersection groups, we show the overlap percentage of GSRC by SRCs (C), the percentage of phased SRCs (D) and the sense/antisense ratio (y-axis; log2) in WT (E) here. In (E) the P-values (one-tailed wilcoxon test) are indicated for only groups with statistically significant differences.