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. 2019 Aug 2;47(15):7809–7824. doi: 10.1093/nar/gkz672

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© The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 2. — Performance comparison of sequence motif identification accuracy. (A) The (E-value), (P-value) and (q-value) derived from TOMTOM for all methods. The Wilcoxon test P-values of the above three scores between DESSO and other five methods. (B) A total of 435 motifs (known motifs) from DESSO can be matched to the JASPAR or TRANSFAC, and 248 motifs (undocumented motifs) do not have any matches (pie chart). For these known motifs, 388 of them are in the JASPAR and 283 are in the TRANSFAC database (bar plot).

Inline graphic — Performance comparison of sequence motif identification accuracy. (A) The (E-value), (P-value) and (q-value) derived from TOMTOM for all methods. The Wilcoxon test P-values of the above three scores between DESSO and other five methods. (B) A total of 435 motifs (known motifs) from DESSO can be matched to the JASPAR or TRANSFAC, and 248 motifs (undocumented motifs) do not have any matches (pie chart). For these known motifs, 388 of them are in the JASPAR and 283 are in the TRANSFAC database (bar plot).