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. 2019 Jun 28;97(9):3741–3757. doi: 10.1093/jas/skz208

Table 1.

Example of the dynamics of bacterial taxa (phylum, family, and genus level) colonization over time (sows and pigs days 7–61 of age) from fecal samples collected from pigs in 2 different experiments

Relative abundance (%)
Exp. 1 Exp. 1 Exp. 1 Exp. 2 Exp. 1 Exp. 2 Exp. 2 Exp. 2 Exp. 2 Exp. 1
Taxon Sows d 7 d 14 d 21 d 26 d 28 d 35 d 42 d 49 d 61
Phylum: Firmicutes 83.77 81.48 61.66 59.49 93.01 79.57 82.30 90.32 93.02 91.48
Family Lactobacillaceae 10.85 18.73 6.30 1.50 31.40 20.43 39.05 17.15 4.87 9.76
Genus: Lactobacillus 10.82 18.60 6.22 1.50 31.20 20.43 39.04 17.14 4.86 9.69
Family: Streptococcaceae 0.12 6.35 2.92 0.54 0.27 1.08 0.21 41.16 52.04 24.84
Genus: Streptococcus 0.11 6.34 2.92 0.54 0.27 1.07 0.21 41.11 51.98 24.77
Family: Clostridiaceae 33.73 10.08 9.11 3.88 0.97 1.27 5.36 4.48 10.74 5.59
Family: Lachnospiraceae 3.81 16.46 16.24 10.20 13.37 33.74 18.22 9.35 9.81 8.75
Family: Ruminococcaceae 7.68 5.61 5.63 4.75 13.20 7.63 6.75 4.86 4.09 8.56
Family: Erysipelotrichaceae 2.97 1.30 7.63 17.54 1.29 1.35 0.45 0.22 0.21 3.46
Family: Veillonellaceae 0.34 0.40 0.43 1.52 0.87 0.45 2.06 1.65 0.12 4.87
Phylum: Bacteroidetes 5.63 10.96 25.40 27.93 2.37 5.03 5.34 5.20 1.63 4.72
Family: Bacteroidaceae 1.56 13.96 13.21 16.01 0.03 0.00 0.00 0.00 0.00 0.00
Genus: Bacteroides 1.56 13.96 13.21 15.65 0.03 0.00 0.00 0.00 0.00 0.00
Family: Prevotellaceae 1.48 1.63 1.81 2.05 0.67 0.90 1.86 1.49 1.01 6.76
Phylum: Proteobacteria 0.82 0.76 5.77 7.42 0.11 0.03 0.03 0.00 0.00 0.09
Family: Enteroacteriaceae 0.93 1.95 5.66 6.96 1.20 0.03 0.02 0.00 0.00 0.21
Genus: Escherichia 0.89 1.90 5.55 6.76 1.17 0.03 0.02 0.00 0.00 0.19
Phylum: Actinbacteria 0.36 2.90 0.55 0.05 1.31 3.10 3.38 0.09 0.08 0.54
Family: Bifidobacteriaceae 0.15 0.82 0.20 0.01 1.59 3.10 3.36 0.09 0.08 0.39
Genus: Bifidobacterium 0.01 3.10 3.36 0.09 0.08