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. 2019 May 20;36(9):1975–1989. doi: 10.1093/molbev/msz126

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© The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 6. — Decay in linkage disequilibrium (LD) with genetic distance. Relationship between LD (R²) and physical distance is depicted for each chromosome. Black points represent values for each window-pair comparison. Lines show nonlinear regression model based on Hill and Weir (1988) and Remington et al. (2001). LD estimates were divided into three categories representing comparison between windows of shared ancestry (Sp–Sp or Sk–Sk) reflecting positive ancestry disequilibrium (AD) or of opposite ancestry (Sk–Sp) reflecting negative AD.