TABLE 2.
Summary of both partial and full-length ToxhATs identified by the repeat annotation pipeline in each isolate
| Species and isolate |
nb | Max lengthc |
Min lengthc |
Avg lengthd |
Med lengthd |
|---|---|---|---|---|---|
| B. sorokiniana | |||||
| CS10 | 42 | 14,079 | 28 | 831 | 251 |
| CS27a | 22 | 1,552 | 26 | 437 | 179 |
| WAI2406 | 35 | 14,082 | 28 | 935 | 225 |
| WAI2411 | 41 | 14,072 | 28 | 891 | 250 |
| P. tritici-repentis | |||||
| PTR1C-BPF | 29 | 20,213 | 32 | 1,081 | 188 |
| P. nodorum | |||||
| SN15 | 18 | 11,153 | 54 | 1,219 | 295 |
| Sn79-1087a | 8 | 537 | 99 | 266 | 261 |
toxa− isolate.
n, total number of ToxhAT annotations identified by the repeat annotation pipeline within the genome.
Maximum (Max) or minimum (Min) length of ToxhAT in base pairs identified in the genome.
Average (Avg) or median (Med) length of ToxhAT in base pairs identified in the genome.