Role of NLRP3 inflammasome in inflammatory bowel diseases

Abstract

Inflammasomes are multiprotein intracellular complexes which are responsible for the activation of inflammatory responses. Among various subtypes of inflammasomes, NLRP3 has been a subject of intensive investigation. NLRP3 is considered to be a sensor of microbial and other danger signals and plays a crucial role in mucosal immune responses, promoting the maturation of proinflammatory cytokines interleukin 1β (IL-1β) and IL-18. NLRP3 inflammasome has been associated with a variety of inflammatory and autoimmune conditions, including inflammatory bowel diseases (IBD). The role of NLRP3 in IBD is not yet fully elucidated as it seems to demonstrate both pathogenic and protective effects. Studies have shown a relationship between genetic variants and mutations in NLRP3 gene with IBD pathogenesis. A complex interaction between the NLRP3 inflammasome and the mucosal immune response has been reported. Activation of the inflammasome is a key function mediated by the innate immune response and in parallel the signaling through IL-1β and IL-18 is implicated in adaptive immunity. Further research is needed to delineate the precise mechanisms of NLRP3 function in regulating immune responses. Targeting NLRP3 inflammasome and its downstream signaling will provide new insights into the development of future therapeutic strategies.

Core tip: NLRP3 inflammasome plays a major role in inflammatory bowel diseases (IBD) pathogenesis through its contribution to chronic inflammatory processes. Abnormal activation of NLRP3 inflammasome has been observed in inflamed tissue of IBD murine models and patients, highlighting its possible pathogenic role in the disease. However, protective effects of NLRP3 function have also been recorded. The pathogenic NLRP3 inflammasome activity in mucosal immune system may be implicated in the aberrant immune responses and in the disruption of intestinal homeostasis that characterizes IBD. Targeting NLRP3 inflammasome and its downstream signaling will provide new insights into the development of future therapeutic strategies.

INTRODUCTION

The innate immune system is the first-line host defense specified to recognize specific microbial pathogens, named pathogen-associated molecular patterns and damage-associated molecular patterns, and to sense microbial and other danger signals. These functions occur in macrophages, neutrophils, monocytes, dendritic cells (DCs), and epithelial cells through host pattern recognition receptors, such as toll-like receptors and nucleotide-binding domain leucine-rich repeat-containing receptors (NLRs)[1-4]. NLRs play a critical role in innate immune responses and intestinal tissue repair[1].

The NLRP (NOD-like receptor family, pyrin domain-containing) subfamily comprises several subtypes and NLRP3 is one of the best-characterized. The multiprotein complex of NLRP3, called the NLRP3 “inflammasome”, consists of three major components—the sensor NLRP3 protein, the adaptor-apoptosis-associated speck-like protein containing a N-terminal PYRIN-PAAD-DAPIN domain and a C-terminal caspase recruitment domain (CARD) (ASC) and the effector protein-caspase-1[5,6]. Activation of NLRP3 occurs when the host is subjected to an exogenous or endogenous stimulus, resulting in the recruitment of ASC and caspase 1. The stimulated NLRP3 interacts with ASC and pro-caspase-1 binds to ASC via CARD to assemble into a large cytosolic complex, which triggers activation of caspase-1. Active caspase-1 cleaves the pro-inflammatory cytokines interleukin 1 β (IL-1β) and IL-18 from their precursors to their biologically active forms[7]. These cytokines induce inflammation by promoting the production of proinflammatory cytokines, chemokines and growth factors (Figure 1), as well as recruiting and activating other immune cells. NLRP3 inflammasome has been associated with a variety of inflammatory and autoimmune conditions including inflammatory bowel diseases (IBD)[8,9]. Crohn’s disease (CD) and ulcerative colitis (UC) are the main types of IBD. UC is usually limited to the colon and consists of diffuse mucosal inflammation, whereas CD can involve inflammation at any part of the gastrointestinal tract (from mouth to anus)[10,11]. Although the etiology of IBD pathogenesis is not fully elucidated, it has been widely suggested that a genetic-environmental mediated dysregulation of the mucosal immune response is implicated in these diseases. The NLRP3 inflammasome, acting as a sensor of microbial and other danger signals, plays a fundamental role in host defense[12-14]. Recent data have demonstrated the function of NLRP3 inflammasome, not only as a crucial mediator of host defense but also as a critical regulator of intestinal homeostasis[15]. However, the studies on the role of NLRP3 inflammasome in IBD have reported controversial findings.

Figure 1.

NLRP3 inflammasome structure. NLRP3 inflammasome consists of three major components-the sensor NLRP3 protein, the adaptor-apoptosis-associated speck-like protein (ASC) which contains a N-terminal PYRIN-PAAD-DAPIN domain (PYD) and a C-terminal caspase recruitment domain (CARD) and the effector protein-caspase-1. Activation of NLRP3 occurs when the cell is subjected to pathogen-associated molecular patterns and damage-associated molecular patterns. The stimulated NLRP3 interacts through PYD domain with ASC and pro-caspase-1 binds to ASC via CARD to assemble into a large cytosolic complex, which triggers activation of caspase-1. Active caspase-1 cleaves the pro-inflammatory cytokines interleukin 1β (IL-1β) and IL-18 from their precursors to their biologically active forms inducing inflammation. ASC: Adaptor-apoptosis-associated speck-like protein; CARD: C-terminal caspase recruitment domain; PYD: PYRIN-PAAD-DAPIN domain; IL: Interleukin; PAMPs: Pathogen-associated molecular patterns; DAMPs: Damage-associated molecular patterns.

NLRP3 INFLAMMASOME IN IBD PATHOGENESIS: DATA FROM ANIMAL AND HUMAN STUDIES

Animal studies

The exact role of NLRP3 in IBD is not yet fully elucidated as it seems to demonstrate both pathogenic and protective effects. The study by Bauer et al[16] was conducted in two IBD models (dextran sulfate sodium and 2,4,6-trinitrobenzene sulfonic acid induced colitis) and showed that mice with NLRP3 deficiency [NLRP3(-/-)] exhibited attenuated colitis. This result was followed by increased numbers of immunosuppressive CD103⁺ tolerogenic DCs[16]. An abnormal NLRP3 activation has also been reported to play an important pathogenic role in IBD, in a study using a murine IBD model[17]. In this report, NLRP3 and ASC protein levels were significantly elevated in the colonic mucosa of deficient mice for anti-inflammatory cytokine IL-10 (IL-10-/-) before the onset of colitis compared to the wild type (WT) mice[17]. Other studies using spontaneous colitis mice showed that the inhibition of caspase-1 activity and the selected blockade of NLRP3 complex ameliorated colonic inflammation and were associated with decreased colitis[18,19]. In contrast, a protective role of NLRP3 inflammasome was recorded in studies presenting that mice with NLRP3, ASC or caspase-1 deficiency exhibited more severe experimental colitis and decreased intestinal epithelial integrity[20,21]. The association of NLRP3 deficiency with IBD severity was also highlighted in an oxazolone-induced colitis murine model, mediated by T helper 2 (Th2) cytokines (IL-4, IL-13)[22]. Th2 cytokines, such as IL-4 and IL-13, were increased at mRNA and protein level in NLRP3-/- mice compared to WT mice[22]. NLRP3-/- and caspase 1-/- mice exhibited severe colitis after oxazolone treatment compared to WT mice[22]. Administration of IL-1β or IL-18 prevented progression of colitis in NLRP3-/- mice, but did not affect the severity of colitis in WT mice[22].

Therapeutic strategies targeting NLRP3 activity are used in IBD murine models, highlighting the potent clinical relevance of NLRP3 in the disease. A micro-RNA (miR-223) has been shown to be an important therapeutic target for IBD[23]. It regulates the NLRP3 inflammasome activity, by interfering and inhibiting mRNA expression of NLRP3 gene[23]. Treatment of experimental colitis mice with nanoparticles for overexpression of miR-223 ameliorated colitis symptoms and caused a decrease in protein levels of NLRP3 and IL-1β[23]. The therapeutic potential of the blockade of IL-1β and IL-18 cytokines has also been reported. Experimental colitis mice with genetic and pharmacological deficiency of IL-1β and IL-18 exhibited attenuated colitis[24]. Lastly, in a murine colitis model, suppression of pyroptosis signaling through Cholecalciterol Cholesterol Emulsion was associated with ameliorated disease[25].

Human studies

Human data have demonstrated that the NLRP3 inflammasome activity plays a key part in IBD pathogenesis. Lazaridis et al[26], presented that ex vivo NLRP3 inflammasome was activated in CD patients whereas in UC patients NLRP3 activation occurred in late disease stage compared to controls. This finding was combined with an in vitro increase in IL-1β concentrations in peripheral blood mononuclear cells of CD patients compared to UC patients and controls[26]. A recent study has displayed an upregulation of NLRP3 components in both CD and UC patients as increased mRNA expression of NLRP3, IL-1β, ASC and Caspase-1 was observed in their colonic biopsies; this result was associated with increased disease activity[27]. Inhibition of NLRP3 inflammasome in CD patients resulted in suppressive response of proinflammatory cytokines and chemokines, emphasizing the pathogenic contribution of NLRP3 aberrant activation in the disease[17].

Moreover, IL-1β and IL-18 cytokines have been increased in plasma and colonic mucosa of IBD patients[28,29]. Increased IL-1β secretion from colonic tissues and macrophages in IBD patients has been correlated to the severity of the disease, by promoting chronic intestinal inflammation[27,28]. In a study encompassing children with IBD, the balance between IL-18 cytokine and its natural inhibitor IL-18-binding protein (IL-18BP) has been involved in IBD pathogenesis[30]. Specific microRNAs have been correlated to UC activity based on a high-throughput profiling of blood serum microRNAs of UC patients[31]. A major involvement of microRNAs in IBD development, through interfering NLRP3 activity, has been observed. NLRP3 deficiency in IBD patients, caused by a microRNA, called miR-223, which inhibits NLRP3 gene expression, was associated with active inflammation state in IBD, as increased miR-223 levels were observed in mucosal biopsies[23,32].

Clinical studies which target NLRP3 inflammasome activity are limited[33,34]. Curcumin, an NLRP3 inhibitor acting by interfering the inflammasome-mediated secretion of IL-1β and activation of caspase-1, has been proven to be a potential and safe agent for the treatment of UC[35]. The use of curcumin combined with mesalamine in UC patients was linked to clinical improvement and endoscopic remission[36,37].

The controversial data on the NLRP3 activity in IBD reveal the complicated and probably diverse role of NLRP3 inflammasome in IBD. The NLRP3 activation seems to be a major characteristic in inflamed tissue of IBD murine models and patients, as high expression levels of its components have been observed. Activation of NLRP3 inflammasome constitutes a crucial step in the initiation of inflammatory processes, which results in tissue damage and IBD clinical manifestations development. Thus, NLRP3 pathogenic effect may be due to increased or aberrant activity of the complex. The etiological factors of inflammasome abnormal activity remain to be clarified. Furthermore, the possibility of the NLRP3 inflammasome exerting a protective function during inflammation as a compensatory mechanism of maintaining intestinal homeostasis, should be investigated. Study on molecular regulation of NLRP3 inflammasome activity during inflammation will provide useful knowledge in development of therapeutic approaches in IBD. Activation of NLRP3 inflammasome as well as endpoints of this process (IL-1β, IL-18, pyroptosis) seem to be promising therapeutic options which need further research.

GENETIC STUDIES ON THE ROLE OF NLRP3 INFLAMMASOME IN IBD

Numerous genetic studies have been performed to explain the association of genetic variants in NLRP3 inflammasome with IBD pathogenesis. These data suggest that NLRP3 inflammasome dysregulation may have a prominent role in the pathogenesis of IBD. Genetic variations could be responsible for NLRP3 enhanced or reduced activity, affecting the microenvironment balance and inflammatory state in pathological conditions such as IBD. Mutations or polymorphisms in NLRP3 have been associated with inflammatory diseases[38-40].

Specific single nucleotide polymorphisms (SNPs), which are located in a regulatory region downstream the NLRP3 gene, have been linked to CD susceptibility. These SNPs have been related to hypoproduction of IL-1β and decreased NLRP3 expression[41]. However, a panel study showed no significant associations among SNPs in the regulatory region of NLRP3 and CD pathogenesis[42]. Another SNP analysis in CD and UC patients of Chinese Han population demonstrated an association between two SNPs in NLRP3 gene, with susceptibility to UC but not to CD[43].

A mutation affecting a component of NLRP3 inflammasome could also contribute to susceptibility to IBD. A study in CD patients, who carry a loss-of-function mutation of T60 CARD8, a negative regulator of inflammasome activation, has reported increased NLRP3 inflammasome activity and excessive production of IL-1β and IL-18 by monocytes[44]. This mutation resulted in decreased overall CARD8 function, which normally regulates negatively NLRP3 activation by inhibiting its oligomerization[44]. A combination of polymorphisms in NLRP3 and CARD8 genes has been linked to high risk of developing CD in men[45].

Nevertheless, hyperactivation of NLRP3 inflammasome has been suggested to be a protective mechanism against colitis in a murine model[46]. Particularly, genetically modified mice carrying the NLRP3 R258W mutation, which induces hyperactivation of NLRP3 inflammasome, were strongly resistant to experimental colitis[46]. This result was due to an excess of local IL-1β production, but not IL-18, which causes the intestinal microbiota to induce local regulatory T cells (Tregs) , maintaining intestinal homeostasis[46].

Mutations or polymorphisms related to NLRP3 inflammasome genes contribute to IBD susceptibility in various ways. It has been reported that an aberrant activity of NLRP3 inflammasome in IBD may be due to a specific genetic background. Further studies, which will elucidate the link among NLRP3 inflammasome associated genes, genetic susceptibility and the molecular function and mechanisms of NLRP3 inflammasome, will provide new insights into the field of IBD pathogenesis.

ROLE OF NLRP3 INFLAMMASOME IN MUCOSAL IMMUNE RESPONSES

There is a complex interaction among the NLRP3 inflammasome, the mucosal immune response and the gut homeostasis. A disrupted inflammasome signaling may result in dysbiosis and increased colonization of pathobionts. Intestinal microbiota plays a crucial role in regulating gut homeostasis[47,48]. Alterations in the microbiota composition initiate aberrant innate immune responses[49]. Microbiota infiltrates into the lamina propria and recruits immune cells which secrete cytokines, chemokines and antimicrobial agents promoting inflammation[49]. NLRP3 inflammasome may also lead to death of innate cells such as macrophages and DCs by triggering a caspace-1-dependent form of cell death, called pyroptosis[50]. Thus, NLRP3 inflammasome can have a dual role in IBD pathogenesis, related to initiation and maintenance of inflammation. Firstly, a disrupted NLRP3 signaling may alter the colonization of intestinal microbiota, causing dysbiosis, a crucial condition for IBD development. Secondly, NLRP3 inflammasome through pyroptosis may promote a vicious circle of inflammation, leading to tissue destruction due to consecutive release of cellular debris, which will reactivate immune cells.

Aberrant Th cell responses play a major role in IBD pathogenesis. In particular, chronic inflammation in CD has been associated with Th1 immune responses. High levels of Th1 cytokines and high expression of transcription factors and cytokine receptors that promote Th1 cell development, have been reported[51]. Moreover, it has been noted that dysfunction of immunosuppressive Th cells, such as Tregs and Th3 cells, may constitute a pathogenic factor for CD. Th17 cells have an important role in IBD, and especially in CD, by stimulating intestinal inflammation and regulating the integrity of epithelial cell barrier[52]. By contrast, UC is considered to be a Th2 driven disease, as inflamed tissue in UC patients expresses high levels of Th2-associated cytokines[53,54].

NLRP3 protein, which is crucial for NLRP3 inflammasome formation, has been proven to be a key regulator in Th2 differentiation. Bruchard et al[55] supported that NLRP3 expression in naïve CD4+ T cells induced a Th2 immune profile in a mouse model. NLRP3 protein can act as a transcriptional factor, regulating the expression of genes associated with the Th2 cells, independently of the inflammasome[55]. IL-1β, which is produced as a result of activation of NLRP3 inflammasome, has been found to contribute to differentiation of Th lymphocytes, such as Th17 and Th1 derived from Th17 cells in vitro and in vivo[56], and to enhance the antigen-driven expansion of naive and memory T cells[57].

The mechanism, by which NLRP3 inflammasome links innate to adaptive immunity in IBD, has not been elucidated. Mak'Anyengo et al[58], using a T cell transfer murine colitis model, examined the role of the NLRP3 inflammasome in DCs’ differentiation, T cell polarization and intestinal inflammation. Intestinal DCs have a significant involvement in antigen presentation, T cell activity and Tregs differentiation. Specifically, intestinal CD103⁺ DCs have immunosuppressive function and promote Tregs activity[59,60]. Mak'Anyengo et al[58] showed that NLRP3 inflammasome-driven cytokine release of IL-1β led to the induction of Th17 inflammatory immune response[58]. NLRP3-deficient mice with decreased IL-1β levels were protected from colitis due to accumulation of CD103⁺ DCs. This study suggested that NLRP3 inflammasome acts as a checkpoint regulator of IL-1β and IL-18 in the intestine, controlling the secretion of DC-expanding cytokines by T cells in vitro and in vivo[58].

NLRP3 inflammasome activation results in the maturation of proinflammatory cytokines IL-1β and IL-18. IL-1β has a multifunctional role in immune responses, inducing cytokine production, enhancing T cell activation and antigen recognition, and directing innate immune cells to the site of infection[61,62]. Increased levels of IL-1β have been recorded in IBD patients and mice models and have been associated with severity of disease[28]. IL-1β signaling is required for the development of acute inflammation in both T cell–independent and T cell–mediated colitis[28]. The pathogenic activity of IL-1β in IBD has been shown to induce the accumulation of IL-17A producing cells and Th17 inflammatory responses. However, the dominant role of IL-1β in IBD development has not been fully determined[28,63]. IL-1β signaling induces activation of nuclear factor kappa light chain enhancer of activated B cells (NF-κB) and mitogen-activated protein kinase signaling cascades which results in the transcriptional activation of genes encoding cytokines, chemokines and a variety of pro-inflammatory mediators[64,65].

IL-18 is another cytokine which belongs to the IL-1 family of cytokines. Constant expression of IL-18 has been proposed to be important for the maintenance of epithelial integrity. IL-18 can promote barrier function in the intestine, controlling the outgrowth of colitogenic bacteria[66]. The role of IL-18 in immune responses has also been noted. It induces interferon gamma (IFN-γ) production by natural killer and T cells in the presence of IL-12, whereas in the absence of IL-12, IL-18 promotes Th2 responses by inducing IL-4 production[67]. Although increased plasma levels of free IL-18 have been reported in CD patients[29], an immunomodulatory activity of this cytokine has been demonstrated in chronic inflammation in IBD[68]. An in vitro analysis of cells isolated from CD lesions showed that IL-18 affects IFN-γ and IL-10 production and apoptosis. T cells isolated from inflamed tissue of CD patients in the presence of IL-18 had increased IFN-γ and decreased IL-10 production compared to controls[68]. Inhibition of IL-18 with recombinant human IL-18 binding protein (rhIL-18BPa) in experimental colitis model was associated with reduced apoptosis of lamina propria CD4+ T cells[68]. Protective function of IL-18 in IBD has been suggested in a T-cell driven colitis model[69]. IL-18R1 receptor expression on CD4+ T cells seems to be crucial for suppression of IL-17 production and Th17 differentiation. In addition, during intestinal inflammation, IL-18/IL-18R1 signaling has been shown to play a key role in Tregs function, by promoting expression of their effector molecules[69].

PERSPECTIVE

NLRP3 inflammasome is probably a key point in inflammatory processes that characterize IBD. The differential role of the inflammasome in IBD is supported by controversial findings about its protective and pathogenic activity; NLRP3 inflammasome has either pathogenic activity, the etiological factors of which have not been elucidated, or it acquires a protective function during the disease, being a compensatory mechanism. Further animal and human studies are needed to examine these hypotheses. Specific genetic background may be responsible for the aberrant activity of NLRP3 inflammasome in IBD. Investigation of the link between genetic susceptibility of NLRP3 inflammasome associated genes and molecular regulation of NLRP3 inflammasome, is of particular importance. NLRP3 inflammasome acts as a potent regulator of mucosal immune responses and intestinal homeostasis due to its association with innate and adaptive immunity. Targeting activation of NLRP3 inflammasome and the related endpoints (IL-1β, IL-18, pyroptosis) will provide new insights into the development of novel therapeutic options in IBD.