TABLE 2.
Statistics for the sequenced W. ichthyophaga genomes.
| Statistic∗ | Minimum∗∗ | Mean∗∗ | Maximum∗∗ | Standard deviation∗∗ |
| Coverage | 221 | 315 | 653 | 99 |
| Genome assembly size (Mbp) | 9.51 | 9.55 | 9.7 | 0.05 |
| Number of contigs | 194 | 286 | 962 | 186 |
| Contig N50 | 31781 | 165956 | 198923 | 45849 |
| GC content (%) | 45.34% | 45.41% | 45.44% | 0.03% |
| CDS total length (Mbp) | 6.76 | 6.89 | 6.92 | 0.04 |
| CDS total length (% of genome) | 69.75% | 72.10% | 72.54% | 0.64% |
| Gene models (n) | 4165 | 4188 | 4225 | 14 |
| CDS average length (bp) | 1601 | 1645 | 1661 | 12 |
| Exons per gene (average) | 3.7 | 3.76 | 3.79 | 0.02 |
| Intron average length (bp) | 67 | 68 | 68 | 0.44 |
| Complete BUSCOs (%) | 86.10% | 87.95% | 88.50% | 0.61% |
| Complete and single-copy BUSCOs (%) | 86.00% | 87.75% | 88.20% | 0.61% |
| Complete and duplicated BUSCOs (%) | 0.10 % | 0.20% | 0.80% | 0.15% |
| Fragmented BUSCOs (%) | 5.50% | 5.95% | 7.40% | 0.43% |
| Missing BUSCOs (%) | 5.70% | 6.10% | 6.90% | 0.27% |
| SNP density (SNPs per total genome size) (%) | 0.13% | 0.32% | 0.40% | 0.08% |
∗Complete data for each genome is available in Supplementary Table S1. ∗∗Calculated from 21 genomes, not including genomes 11 (failed sequencing) and 23 (outgroup species). BUSCOs, Benchmarking Universal Single-Copy Orthologs.