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. 2019 Sep 4;13:61. doi: 10.3389/fninf.2019.00061

Figure 1.

Figure 1

Example of gantry-tilt correction. Using “dcm2niix,” we converted the DICOM files to a NIfTI file, which had a 30 degree tilt. The output provides the uncorrected image (A) and the tilt-corrected image (B). We see that the reconstructed image without correction appears fine within the axial plane, but out of plane has an odd 3D shape. This shape will be corrected with an affine transformation, which is done in the conversion, correcting the image as seen in (B).