Table 1.
log-rank analysis of 13 tagSNPs in 3 genes found by microarray
| VASST | All ethnicities (n = 616) |
Caucasians only (n = 517) |
|||||
|---|---|---|---|---|---|---|---|
| Gene | SNP | p value | p value | p value | p value | p value | p value |
| (Nyholt) | (HWE) | (Nyholt) | (HWE) | ||||
| TNFAIP2 | rs8176373 | 0.0019 | 0.018 | 0.326 | 0.0072 | 0.063 | 0.676 |
| TNFAIP2 | rs749206 | 0.005 | 0.050 | 0.978 | 0.024 | 0.211 | 0.959 |
| TNFAIP2 | rs710100 | 0.082 | 0.803 | 0.380 | 0.194 | 1.000 | 0.173 |
| TNFAIP2 | rs3178152 | 0.221 | 1.000 | 0.731 | 0.303 | 1.000 | 0.606 |
| NFKBIA | rs696 | 0.223 | 1.000 | 0.947 | 0.326 | 1.000 | 0.905 |
| NFKBIA | rs3138055 | 0.395 | 1.000 | 0.915 | 0.258 | 1.000 | 0.584 |
| NFKBIA | rs2233514 | 0.585 | 1.000 | 0.102 | 0.436 | 1.000 | 0.053 |
| NFKBIA | rs1957106 | 0.759 | 1.000 | 0.055 | 0.887 | 1.000 | 0.210 |
| NFKB1 | rs1599961 | 0.138 | 1.000 | 0.066 | 0.240 | 1.000 | 0.035 |
| NFKB1 | rs230521 | 0.156 | 1.000 | 0.329 | 0.172 | 1.000 | 0.102 |
| NFKB1 | rs3774934 | 0.201 | 1.000 | 0.299 | 0.953 | 1.000 | 0.569 |
| NFKB1 | rs11722146 | 0.239 | 1.000 | 0.489 | 0.210 | 1.000 | 0.171 |
| NFKB1 | rs230542 | 0.397 | 1.000 | 0.157 | 0.395 | 1.000 | 0.039 |
HWE = Hardy-Weinberg equilibrium.