Table 2.
Crystal | d‐methionine bound Nm MetQ | l‐methionine bound Nm MetQ | Substrate‐free NmMetQ |
---|---|---|---|
Wavelength (å) | 0.9794 | 0.9792 | 0.9794 |
Resolution range (å) | 34.31–1.678 (1.738–1.678) | 34.2–1.547 (1.602–1.547) | 34.22–1.559 (1.615–1.559) |
Space group | P 1 | P 1 | P 21 21 2 |
Unit cell (a b c (å), α β γ (°)) | 79.66, 87.93, 91.64, 114.83, 104.12, 105.39 | 79.58, 87.65, 91.63, 114.70, 104.41, 105.24 | 52.56, 89.66, 45.088 |
Total reflections | 3,103,914 (143,999) | 1,954,462 (86,262) | 203,203 (7,841) |
Unique reflections | 219,472 (21,547) | 277,550 (13,387) | 30,754 (2,741) |
Multiplicity | 14.1 (13.9) | 7.0 (6.4) | 6.5 (5.4) |
Completeness (%) | 96.04 (91.50) | 95.95 (93.74) | 98.77 (89.75) |
Mean I/sigma(I) | 10.5 (0.7) | 18.8 (1.7) | 10.4 (2.4) |
Wilson B‐factor (å2) | 27.47 | 23.04 | 17.16 |
R‐merge | 0.132 (4.454) | 0.042 (0.906) | 0.167 (3.329) |
R‐meas | 0.137 (4.635) | 0.049 (1.086) | 0.181 (3.692) |
R‐pim | 0.036 (1.249) | 0.018 (0.422) | 0.071 (1.551) |
CC1/2 | 0.999 (0.294) | 1 (0.723) | 0.995 (0.182) |
Reflections used in refinement | 218,427 (20,806) | 27,7,479 (27,097) | 30,752 (2741) |
Reflections used for R‐free | 11,054 (954) | 13,991 (1,396) | 2,000 (179) |
R‐work | 0.177 (0.355) | 0.162 (0.263) | 0.188 (0.258) |
R‐free | 0.201 (0.366) | 0.180 (0.296) | 0.220 (0.291) |
Number of non‐hydrogen atoms | 12,841 | 13,172 | 2,143 |
Macromolecules | 11,454 | 11,448 | 1,895 |
Solvent | 1,387 | 1,724 | 248 |
Protein residues | 1,451 | 1,452 | 241 |
RMS bonds (å) | 0.010 | 0.005 | 0.003 |
RMS angles (°) | 1.11 | 0.92 | 0.68 |
Ramachandran favored (%) | 97.91 | 97.84 | 97.49 |
Ramachandran allowed (%) | 2.09 | 2.09 | 2.51 |
Ramachandran outliers (%) | 0.00 | 0.07 | 0.00 |
Rotamer outliers (%) | 1.47 | 1.23 | 0.99 |
Clashscore | 2.73 | 2.60 | 2.66 |
Average B‐factor (å2) | 34.89 | 29.39 | 25.47 |
Macromolecules | 33.95 | 27.78 | 24.52 |
Solvent | 42.69 | 40.08 | 32.69 |
Number of TLS groups | 4 |
Note: Statistics for the highest‐resolution shell are shown in parentheses.
Abbreviations: TLS, translation/libration/screw.