Table 1.
Assembly | Illumina | Illumina + PacBio |
---|---|---|
Total assembly size | 424 Mb | 452 Mb |
Number of scaffolds (≥500 bp) | 4,184 | 4,033 |
Longest scaffold | 9.29 Mb | 9.98 Mb |
N50 contig (size/number) | 49.21 kb/2,464 | |
N50 scaffold (size/number) | 1.44 Mb/80 | 1.83 Mb/67 |
N90 scaffold (size/number) | 306.62 kb/332 | 363.87 kb/282 |
% of N | 5.78% | 2.98% |
Annotation | ||
Number of protein-coding genes | 29,604 | |
Number of small RNAs | 816 | |
Number of long noncoding genes | 1,982 |